PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022945881.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 284aa    MW: 32200.3 Da    PI: 4.9002
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022945881.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.25.6e-20101150154
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                     s+ykGVr+++ +g+W+AeIrd + +   r r++lg+++taeeA++a++  r+++e
  XP_022945881.1 101 SKYKGVRQRP-WGKWAAEIRDpF-K---RSRVWLGTYDTAEEAYQAYESKRLQFE 150
                     89********.**********55.3...5*********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MPHPNQRSVS DRKFKQSTNF SGDPKMRRKV RIICYDPDAT DASSSEDEGE VYGRLRRRLN  60
KKNRIIHEID LPTPMNAPES KSSKNSNNGN NNPKSRRLSS SKYKGVRQRP WGKWAAEIRD  120
PFKRSRVWLG TYDTAEEAYQ AYESKRLQFE ATAAEMATGN GTVSEQTDSS VSTTETTMSR  180
TSPPSVLEWN DSTSQSREGD SIKEKTDTNM NYLQEADLGN EFGWSLADGI GMFLDDFASL  240
DNTHFFAFAD ADDEPCFLPN FDCDHIWNAE ISSWLDEPIN ITCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.12e-29ERF family protein