PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022945854.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 255aa    MW: 28868.6 Da    PI: 8.0715
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022945854.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.32.3e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W +eEd++l+  ++++G  +W++ ++  g+ R++k+c++rw +yl
   XP_022945854.1 14 KGPWAAEEDQILISFIQKHGHANWRALPKLAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP
2Myb_DNA-binding53.17.1e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+eE+  ++ ++++lG++ W++Ia+ ++ gRt++++k++w+++l
   XP_022945854.1  67 RGNFTQEEQNTILYLHEKLGNR-WSAIAAQLP-GRTDNEIKNFWHTHL 112
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MVRAPCCQKT GLKKGPWAAE EDQILISFIQ KHGHANWRAL PKLAGLLRCG KSCRLRWINY  60
LRPDIKRGNF TQEEQNTILY LHEKLGNRWS AIAAQLPGRT DNEIKNFWHT HLKKRAMKKQ  120
SNDSAIVEPK SKPPQKLNSS NQYEFPCSSL DHSSVTDSPA AVWGGCNEIE KEQRIEIFEA  180
FHQTGGGHGA EEASTRPMFK SSAFNDEEQV QSLFRAMDSM EFGCYYDNGS SMNDGMEFWF  240
SVFVKAGGSL NDPAF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.16e-74MYB family protein