PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022945583.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 625aa MW: 66405.7 Da PI: 9.4955

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022945583.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.3e-05	69	91	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_022945583.1 69 FICEVCNKGFQREQNLQLHRRGH 91 89*******************88 PP
2	zf-C2H2	12.4	0.00048	145	167	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ XP_022945583.1 145 WKCDKCSKRYAVQSDWKAHSKTC 167 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 625 aa Download sequence
MAASSSSVPL FGSRDEAQMR QQQQQQQQQQ SNSSGVPPPK KKRNQPGTPN PDAEVIALSP 60 KTLMATNRFI CEVCNKGFQR EQNLQLHRRG HNLPWKLKQK SNKEPKRKVY LCPEPTCVHH 120 DPSRALGDLT GIKKHYSRKH GEKKWKCDKC SKRYAVQSDW KAHSKTCGTR EYRCDCGTLF 180 SRRDSFITHR AFCDALAQES ARHPTNLGSA MGGHLYGGNS NVGLTLSQVP QMSSLQDIPN 240 ITQSDVLRLG GGGRTGQFNH LLPPSIGSSF RPPPQQAMPS SAAAAAFFLN DQTSQNSFHE 300 DHGSQSQQGL FGNKAFHGLM QFSDMQSHTS NSNNPSSNLF NLGFISNPTG DSTTNMNNNN 360 NTNSNNTSNS NNNSNSNNNN LQSSLLNQFN GTNNGNNEGG ASNIFSMMGD QMNSGAVPSL 420 YSNTTGVGGS GTSGAIAHMS ATALLQKAAQ LGSTTSSSNT TATLLRSFGS SSTSGGKASD 480 RTLFPPSYGG VFGENESNLQ DLMNSFTTGS SAGGLFGGGM SSFGTFDGGN NRPNNMETLE 540 DPKLQQNLSS VSMGGTDRLT RDFLGVGQIV RSMSSGGGGG GGSGGGGYSQ REHKQPPQGI 600 VMEGNESNSA ASSQAFGGGG NGNYQ

Sequence ? help Back to Top

Protein Sequence Length: 625 aa Download sequence

MAASSSSVPL FGSRDEAQMR QQQQQQQQQQ SNSSGVPPPK KKRNQPGTPN PDAEVIALSP  60
KTLMATNRFI CEVCNKGFQR EQNLQLHRRG HNLPWKLKQK SNKEPKRKVY LCPEPTCVHH  120
DPSRALGDLT GIKKHYSRKH GEKKWKCDKC SKRYAVQSDW KAHSKTCGTR EYRCDCGTLF  180
SRRDSFITHR AFCDALAQES ARHPTNLGSA MGGHLYGGNS NVGLTLSQVP QMSSLQDIPN  240
ITQSDVLRLG GGGRTGQFNH LLPPSIGSSF RPPPQQAMPS SAAAAAFFLN DQTSQNSFHE  300
DHGSQSQQGL FGNKAFHGLM QFSDMQSHTS NSNNPSSNLF NLGFISNPTG DSTTNMNNNN  360
NTNSNNTSNS NNNSNSNNNN LQSSLLNQFN GTNNGNNEGG ASNIFSMMGD QMNSGAVPSL  420
YSNTTGVGGS GTSGAIAHMS ATALLQKAAQ LGSTTSSSNT TATLLRSFGS SSTSGGKASD  480
RTLFPPSYGG VFGENESNLQ DLMNSFTTGS SAGGLFGGGM SSFGTFDGGN NRPNNMETLE  540
DPKLQQNLSS VSMGGTDRLT RDFLGVGQIV RSMSSGGGGG GGSGGGGYSQ REHKQPPQGI  600
VMEGNESNSA ASSQAFGGGG NGNYQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14580.1	1e-118	C2H2 family protein