PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022945561.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 349aa    MW: 39209.6 Da    PI: 7.0344
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022945561.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.00046213235123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C +Cg  F++   L  H+r+H
  XP_022945561.1 213 HECAICGAEFTSGQALGGHMRRH 235
                     78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MEVDHEDGVM GSKEQALIAK GKRTKRPRLH SPTPFTISSN GEAGFVVLDH DHDHDSNVVA  60
ENNDFVAENN DYVAVPVHNV SFSPSSSSAE LQPSITTDEE EDMANCLILL AQGRPQTPKH  120
VDNNRSTVGA EKGVGIGCYG YECKTCYRTF PSFQALGGHR ASHKKSKAIE AEKKVLLCSD  180
DEEIQFKNNM THSISLQLNQ KGSLCSNGKG KVHECAICGA EFTSGQALGG HMRRHRAMPV  240
AMNTALSLTP MAMEGEDQRQ PKRQRNMVSL DLDLNLPAPQ EHDHHRESKF MIKSNQYQQQ  300
QTQHQTQQQT QHQTQQQQQQ YKQQQQQKQQ QQQQQPLVFP SRTLVDCHY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04390.13e-54C2H2 family protein