PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022945210.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | GRF | ||||||||
Protein Properties | Length: 119aa MW: 14006 Da PI: 10.9124 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 52.2 | 1e-16 | 77 | 118 | 1 | 42 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrks 42 d+ep+rCrRtDGKk+RCs+ + + +k+ ErH+hrg++ srk XP_022945210.1 77 DPEPRRCRRTDGKKRRCSKVAFPASKYYERHMHRGKNCSRKL 118 79***********************************99985 PP | |||||||
2 | QLQ | 54.4 | 3.9e-19 | 9 | 42 | 2 | 35 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 +FTaaQ+q+L+ Q+l++Ky+ ++ P+Pp+Ll+ i XP_022945210.1 9 PFTAAQWQELELQALIFKYMXSGIPLPPHLLFTI 42 8*****************************9866 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 119 aa Download sequence |
MSGGRNRLPF TAAQWQELEL QALIFKYMXS GIPLPPHLLF TINTTSFHSP FISTLFPHQY 60 AHVGWNYLQM GYGRKIDPEP RRCRRTDGKK RRCSKVAFPA SKYYERHMHR GKNCSRKLM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 4e-33 | GRF family protein |