PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022944998.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | YABBY | ||||||||
Protein Properties | Length: 172aa MW: 18792.1 Da PI: 8.2943 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 150.1 | 2.2e-46 | 9 | 156 | 1 | 163 |
YABBY 1 advfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesasts 95 +d+++ s+++Cyv+CnfCnt+lav +P l+ +vtv+CGhC++l ++ + q + + + l ++++ sn++++ ++++s XP_022944998.1 9 MDLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPPLQ---------GQ---CIDHPLSFQSQVGFSNDIRKGASTSS 91 578999*************************************985533333222.........22...23345556666666677777666666 PP YABBY 96 vsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 ss s++ +e+p + v++PPek+ r Psaynrf+keeiqrika+nP+i hreafsaaaknWa + XP_022944998.1 92 SSS---SSSMANESPSANFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARY 156 666...5677788899999***********************************************76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MSSEDKSSMD LVQPSDHLCY VKCNFCNTVL AVGIPCRRLL DTVTVKCGHC SNLSFLSTRP 60 PLQGQCIDHP LSFQSQVGFS NDIRKGASTS SSSSSSSMAN ESPSANFVVK PPEKKHRLPS 120 AYNRFMKEEI QRIKAANPEI PHREAFSAAA KNWARYIPNS ADGSASGTHD NE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69180.1 | 3e-67 | YABBY family protein |