PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022944887.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 466aa MW: 50697.1 Da PI: 8.1369

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022944887.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.4	3.1e-33	200	256	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgsefprsYY+Ct+ +Cpvkkkvers +++v+ei+Y+geHnhe XP_022944887.1 200 DDGYNWRKYGQKQVKGSEFPRSYYKCTYLNCPVKKKVERSL-EGHVTEIIYKGEHNHE 256 8**************************************.*************8 PP
2	WRKY	104	8.2e-33	378	436	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC+v+k+ver+++d+k+v++tYeg+Hnh+ XP_022944887.1 378 LDDGYRWRKYGQKTVKGNPYPRSYYKCTTHGCNVRKHVERASTDQKAVITTYEGKHNHD 436 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MGDDEDKLPP SSVPSPLKSK AFPLRPTINL PPRTSMESLL SGGPGLGLGF SPGPMTLVSS 60 FFSDSDDCKS FSQLLAGAMT SPVAVPPTAS ELKDSAGLPD SPGLFSPDQG TFGLTHQQAL 120 AQVTMQAVEA YSHKQIQAHS VAGSAASSKL LTVFPSEKAK DQPVPLQLLN SAVVSKESSD 180 ISQSDQRSVS SSCNVDRPAD DGYNWRKYGQ KQVKGSEFPR SYYKCTYLNC PVKKKVERSL 240 EGHVTEIIYK GEHNHERPQP NKRAKDVGNS NGYSSVHGNT DLYSQVKSGY LNKLNEQSAV 300 SSVVKKDRES NLVTHGQSLD ASDSEGGGEV ETGPNRNDED EPDAKRRNTE ARIEPVSSHR 360 TLTESRIIVQ TTSEVDLLDD GYRWRKYGQK TVKGNPYPRS YYKCTTHGCN VRKHVERAST 420 DQKAVITTYE GKHNHDVPAG KISSHGTANS NVPRLKSQNI GTEKDS

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MGDDEDKLPP SSVPSPLKSK AFPLRPTINL PPRTSMESLL SGGPGLGLGF SPGPMTLVSS  60
FFSDSDDCKS FSQLLAGAMT SPVAVPPTAS ELKDSAGLPD SPGLFSPDQG TFGLTHQQAL  120
AQVTMQAVEA YSHKQIQAHS VAGSAASSKL LTVFPSEKAK DQPVPLQLLN SAVVSKESSD  180
ISQSDQRSVS SSCNVDRPAD DGYNWRKYGQ KQVKGSEFPR SYYKCTYLNC PVKKKVERSL  240
EGHVTEIIYK GEHNHERPQP NKRAKDVGNS NGYSSVHGNT DLYSQVKSGY LNKLNEQSAV  300
SSVVKKDRES NLVTHGQSLD ASDSEGGGEV ETGPNRNDED EPDAKRRNTE ARIEPVSSHR  360
TLTESRIIVQ TTSEVDLLDD GYRWRKYGQK TVKGNPYPRS YYKCTTHGCN VRKHVERAST  420
DQKAVITTYE GKHNHDVPAG KISSHGTANS NVPRLKSQNI GTEKDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	1e-122	WRKY family protein