PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022944611.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 276aa    MW: 31601.1 Da    PI: 7.9934
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022944611.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.41.7e-10116165355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++  rE+ RRd++N++f eL  +l +    + +K +K+ iL  A++ + +Lq
  XP_022944611.1 116 TSKACREKLRRDKLNERFLELSAVLEPG---KLPKTDKVVILSDAIRMVTDLQ 165
                     67889**********************9...9****************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MFHFRRILFY FADDEQLLTC IHSNDQIILH EQKRKQKQKQ KGNWNWLFDY STMEDLPVVG  60
AHFSPPQSVS FSWSNPSINF PSNKHSLEVD CSYEDLDSLK EVGRKRLKAE TSSASTSKAC  120
REKLRRDKLN ERFLELSAVL EPGKLPKTDK VVILSDAIRM VTDLQCEIEK LKESEDDLKE  180
KIKELKVEKN ELRDEKQRLR AEKEKLELQI KAVNARAAAD IQHPPPTLSA AFTAQGQAAG  240
NKLMPFIGYP GIAMWQFLPP ATVDTSQDHV LRPPVA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1103109GRKRLKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.15e-60bHLH family protein