PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022944558.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NF-YC | ||||||||
Protein Properties | Length: 179aa MW: 20222.7 Da PI: 9.8965 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 29.9 | 1.2e-09 | 108 | 170 | 8 | 70 |
NF-YC 8 kqiekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenk 70 ++ e++++ k ++P+ rikki++ ++ +i ea l+ ka e+f++++ ++ + + + XP_022944558.1 108 EEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDR 170 457788888999************9999999******************99877776655544 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence |
MASSKKSSSE AKSKEAGTSK PAPNNKTHNN NARTIDKVYS KKKKVSNSNK HTSNGSVKEN 60 EVLPISAPGD AEEDRAETTS KSPNTSKSKK VKRNRGKKEQ NGYVEEEEEA EEEAEEKIYK 120 FPMNRIKKIM RDENSDLRIN QEALFLVNKA TEMFLVQFCK DAYACCAQDR KKSLAYKHL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07980.1 | 4e-20 | NF-YC family protein |