PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022944557.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NF-YC | ||||||||
Protein Properties | Length: 217aa MW: 24644.7 Da PI: 9.8043 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 47.7 | 3.4e-15 | 108 | 199 | 8 | 99 |
NF-YC 8 kqiekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 ++ e++++ k ++P+ rikki++ ++ +i ea l+ ka e+f++++ ++ + + ++++l ++++v + + +dfl d vp++ XP_022944557.1 108 EEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEK 199 457788888999************9999999**********************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MASSKKSSSE AKSKEAGTSK PAPNNKTHNN NARTIDKVYS KKKKVSNSNK HTSNGSVKEN 60 EVLPISAPGD AEEDRAETTS KSPNTSKSKK VKRNRGKKEQ NGYVEEEEEA EEEAEEKIYK 120 FPMNRIKKIM RDENSDLRIN QEALFLVNKA TEMFLVQFCK DAYACCAQDR KKSLAYKHLS 180 SVVCKRKRYD FLSDFVPEKL KFEDALKERS MAESGKD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 170 | 188 | RKKSLAYKHLSSVVCKRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07980.1 | 5e-34 | NF-YC family protein |