PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022944493.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 405aa MW: 46302.5 Da PI: 6.733

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022944493.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	51	2.6e-16	36	119	6	95
..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 + ++ l+ + l +p+kfa+++ + s +tl ++g +W ++l +++++++++++GW +Fvk + +++g +vF+++g+s f+ + XP_022944493.1 36 VVPSILQDKKLKIPNKFAKKFADD--LSDLVTLVVPNGHRWVLEL--KRHGRSMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFN--FY 119 3455566677*********877..7789***********..*******************************999994..44 PP
2	B3	68.5	9.5e-22	307	397	4	98
E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 v+ +s+v + l +p kfae++ +g+ s ++tl+ +sg++W+v++ + + ++ lt+GW +Fv +n+Lke D++vF+l++ + + l+v++f XP_022944493.1 307 VMRQSYVRRGFHLHIPSKFAEKYlKGV---SGDITLQVSSGKQWRVRC--IREGPGTKLTRGWADFVVENDLKEEDVCVFELIDIKATALKVTIF 396 57899****************7666...348***********..67777789********************9889999***9 PP - CS B3 98 r 98 r XP_022944493.1 397 R 397 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MENSVTAIVE SDEQEGAQSF NESSPVRRAG LFYKLVVPSI LQDKKLKIPN KFAKKFADDL 60 SDLVTLVVPN GHRWVLELKR HGRSMWFEDG WHDFVKHHCI QVGQLLVFRF EGNSVFNFYM 120 FNLTAISNGP CNTSNASSEQ NDGEQCPVTL GKEAEYKKLV EIFGTSSPDP SPRPSVKNTL 180 CGFSDQQKFN GSCNGTSIKN FMHWFDTENM HPLKDLDKLQ LLKSNQDIGI QFDGDELAKA 240 RENFDFEFSD ETNERARKKK LKVEPIDYYN DNEPIVEKNS ENIPHKISRM ACGVEEFKPG 300 NPFCWIVMRQ SYVRRGFHLH IPSKFAEKYL KGVSGDITLQ VSSGKQWRVR CIREGPGTKL 360 TRGWADFVVE NDLKEEDVCV FELIDIKATA LKVTIFRVHD DPTKT

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MENSVTAIVE SDEQEGAQSF NESSPVRRAG LFYKLVVPSI LQDKKLKIPN KFAKKFADDL  60
SDLVTLVVPN GHRWVLELKR HGRSMWFEDG WHDFVKHHCI QVGQLLVFRF EGNSVFNFYM  120
FNLTAISNGP CNTSNASSEQ NDGEQCPVTL GKEAEYKKLV EIFGTSSPDP SPRPSVKNTL  180
CGFSDQQKFN GSCNGTSIKN FMHWFDTENM HPLKDLDKLQ LLKSNQDIGI QFDGDELAKA  240
RENFDFEFSD ETNERARKKK LKVEPIDYYN DNEPIVEKNS ENIPHKISRM ACGVEEFKPG  300
NPFCWIVMRQ SYVRRGFHLH IPSKFAEKYL KGVSGDITLQ VSSGKQWRVR CIREGPGTKL  360
TRGWADFVVE NDLKEEDVCV FELIDIKATA LKVTIFRVHD DPTKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-29	B3 family protein