PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022944309.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 333aa MW: 37462.6 Da PI: 7.2982

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022944309.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.9	7.6e-05	168	187	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ XP_022944309.1 168 FSCPLCFKTFNRYNNMQMHM 187 89*****************9 PP
2	zf-C2H2	15.5	4.9e-05	252	274	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cgk F + + ++H +++ XP_022944309.1 252 FTCRKCGKAFAVRGDWRTHEKNC 274 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MTDPYSMLHP YFSSSSKSSY SPYHHLFSLS YSNDNNTLKN TSSSSSSSFT TTHGSFSPDS 60 CSSPQVLPLL SLSPARHDQE HHSCRPCEDE EDEEEESVTV ALHLGLPTPP SSDLILRLSS 120 TEISDKEDQQ EAVPVVVPNY YSSSTAGLNK GQYWIPTPAQ ILIGPTHFSC PLCFKTFNRY 180 NNMQMHMWGH GSQYRKGPQS LRGTQPTAML RLPCYCCAPG CRNNIDHPRS KPLKDFRTLQ 240 THYKRKHGIK PFTCRKCGKA FAVRGDWRTH EKNCGKLWHC TCGSDFKHKR SLKDHIKAFG 300 HGHAAYGIDS FDEDDEAASE IEHDNDLSLR NGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-116	C2H2 family protein