PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022944308.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 333aa MW: 37462.6 Da PI: 7.2982 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.9 | 7.6e-05 | 168 | 187 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ XP_022944308.1 168 FSCPLCFKTFNRYNNMQMHM 187 89*****************9 PP | |||||||
2 | zf-C2H2 | 15.5 | 4.9e-05 | 252 | 274 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cgk F + + ++H +++ XP_022944308.1 252 FTCRKCGKAFAVRGDWRTHEKNC 274 89*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence |
MTDPYSMLHP YFSSSSKSSY SPYHHLFSLS YSNDNNTLKN TSSSSSSSFT TTHGSFSPDS 60 CSSPQVLPLL SLSPARHDQE HHSCRPCEDE EDEEEESVTV ALHLGLPTPP SSDLILRLSS 120 TEISDKEDQQ EAVPVVVPNY YSSSTAGLNK GQYWIPTPAQ ILIGPTHFSC PLCFKTFNRY 180 NNMQMHMWGH GSQYRKGPQS LRGTQPTAML RLPCYCCAPG CRNNIDHPRS KPLKDFRTLQ 240 THYKRKHGIK PFTCRKCGKA FAVRGDWRTH EKNCGKLWHC TCGSDFKHKR SLKDHIKAFG 300 HGHAAYGIDS FDEDDEAASE IEHDNDLSLR NGD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57670.1 | 1e-116 | C2H2 family protein |