PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022944303.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 346aa MW: 39615.6 Da PI: 6.5381

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022944303.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.2	3e-05	174	193	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ XP_022944303.1 174 FSCPVCFKTFNRYNNMQMHM 193 89*****************9 PP
2	zf-C2H2	14.6	9.9e-05	258	280	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ XP_022944303.1 258 FMCRKCGKAFAVRGDWRTHEKNC 280 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MDDPSTNFFT DLFKFNYPTN FHHHHNPPPS NPPPNFFHAP PSSPPLRQAL PLLRLSPTRS 60 SQDHHLSFTS SSAMEIDNNN NNNDNEDVSV TVALHIGLPS SNASEMATLL VSDNNNQNEE 120 EDQLEEELEE EEDEDEEQQQ AGITISGFSL SSRLNKGQYW IPTPSQILIG PTQFSCPVCF 180 KTFNRYNNMQ MHMWGHGSQY RRGPESLRGT QPTGMLRLPC YCCSPGCRNN IDHPRAKPLK 240 DFRTLQTHYK RKHGIKPFMC RKCGKAFAVR GDWRTHEKNC GKLWYCICGS DFKHKRSLKD 300 HIKAFGNGHA AYNSNINNNG DHRQHHHHAF DEEDESAYSE VEEDHD

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MDDPSTNFFT DLFKFNYPTN FHHHHNPPPS NPPPNFFHAP PSSPPLRQAL PLLRLSPTRS  60
SQDHHLSFTS SSAMEIDNNN NNNDNEDVSV TVALHIGLPS SNASEMATLL VSDNNNQNEE  120
EDQLEEELEE EEDEDEEQQQ AGITISGFSL SSRLNKGQYW IPTPSQILIG PTQFSCPVCF  180
KTFNRYNNMQ MHMWGHGSQY RRGPESLRGT QPTGMLRLPC YCCSPGCRNN IDHPRAKPLK  240
DFRTLQTHYK RKHGIKPFMC RKCGKAFAVR GDWRTHEKNC GKLWYCICGS DFKHKRSLKD  300
HIKAFGNGHA AYNSNINNNG DHRQHHHHAF DEEDESAYSE VEEDHD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-128	C2H2 family protein