PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022944259.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 262aa MW: 28561.1 Da PI: 7.2976

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022944259.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.8	0.00036	101	123	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C+++F++ L H +H XP_022944259.1 101 YECKICNRRFNSFQALGGHRASH 123 99**********99999998887 PP
2	zf-C2H2	14.4	0.00011	174	196	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H XP_022944259.1 174 HECSICGLEFSSGQALGGHMRRH 196 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
METPNEFMGS NDQIHVVAVK GRRNKRMRLI CGGFEVTSSS SCGGGGGGEE FPAASSYVSG 60 EISTEEEEDM ANCLILLAQG DGHRRQRQAL HDRTTTGFYV YECKICNRRF NSFQALGGHR 120 ASHKKPKPPA PIVATATAMA VEERVEAEFN KMVPVAAAAA AVTNFQIQKG GKVHECSICG 180 LEFSSGQALG GHMRRHRATA AVTTAQQENH HNSSGEIKRR NILELDLNLP APEEDLRETK 240 FQFTATPQTI VFAAPTLVDC HY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	6e-49	C2H2 family protein