PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022944169.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 326aa    MW: 35347.5 Da    PI: 7.3725
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022944169.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.63.8e-32151207158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep++VNaKQyq+Il+RRq+Rak+e e+kl +k rkpylheSRh+hA+rR+RgsgGrF
  XP_022944169.1 151 QEPVFVNAKQYQGILRRRQARAKAEVENKL-IKIRKPYLHESRHQHAMRRARGSGGRF 207
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MQQTSSYSEP WWRSIGYNQI SPPAAGGNLS NSTSLECPNG ASESNDGPSM SNDDLNEDDD  60
DDTTKDSHAV SYGQVQNNSQ HAVSAAPTVH GGCITQPPQL ELVGHSIACA SNLYQDPYYA  120
GVMAAYGHQP GYPPFLGMPH ARMALPLEVT QEPVFVNAKQ YQGILRRRQA RAKAEVENKL  180
IKIRKPYLHE SRHQHAMRRA RGSGGRFAKK NEVNSSSSTM KNKDSGSGQA FSSHSAGSSG  240
SEAAPCALAE TWNSSNGQQE ARTQLHEAYK ARSYVNGSEQ FHNYSSFQAS SYALRSGERG  300
DDGDCSGQQR GSISENQAAQ RRLAIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.23e-72NF-YA family protein