PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022944167.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 343aa    MW: 37270.6 Da    PI: 7.3727
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022944167.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.54.1e-32168224158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep++VNaKQyq+Il+RRq+Rak+e e+kl +k rkpylheSRh+hA+rR+RgsgGrF
  XP_022944167.1 168 QEPVFVNAKQYQGILRRRQARAKAEVENKL-IKIRKPYLHESRHQHAMRRARGSGGRF 224
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MQSKPRSVNQ LESEPPNMQQ TSSYSEPWWR SIGYNQISPP AAGGNLSNST SLECPNGASE  60
SNDGPSMSND DLNEDDDDDT TKDSHAVSYG QVQNNSQHAV SAAPTVHGGC ITQPPQLELV  120
GHSIACASNL YQDPYYAGVM AAYGHQPGYP PFLGMPHARM ALPLEVTQEP VFVNAKQYQG  180
ILRRRQARAK AEVENKLIKI RKPYLHESRH QHAMRRARGS GGRFAKKNEV NSSSSTMKNK  240
DSGSGQAFSS HSAGSSGSEA APCALAETWN SSNGQQEART QLHEAYKARS YVNGSEQFHN  300
YSSFQASSYA LRSGERGDDG DCSGQQRGSI SENQAAQRRL AIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.24e-73NF-YA family protein