PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022944165.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 356aa    MW: 38719.3 Da    PI: 7.5911
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022944165.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.44.3e-32181237158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep++VNaKQyq+Il+RRq+Rak+e e+kl +k rkpylheSRh+hA+rR+RgsgGrF
  XP_022944165.1 181 QEPVFVNAKQYQGILRRRQARAKAEVENKL-IKIRKPYLHESRHQHAMRRARGSGGRF 237
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MRSPLLRQAF PGLCSSSECH SKPRSVNQLE SEPPNMQQTS SYSEPWWRSI GYNQISPPAA  60
GGNLSNSTSL ECPNGASESN DGPSMSNDDL NEDDDDDTTK DSHAVSYGQV QNNSQHAVSA  120
APTVHGGCIT QPPQLELACA SNLYQDPYYA GVMAAYGHQP GYPPFLGMPH ARMALPLEVT  180
QEPVFVNAKQ YQGILRRRQA RAKAEVENKL IKIRKPYLHE SRHQHAMRRA RGSGGRFAKK  240
NEVNSSSSTM KNKDSGSGQA FSSHSAGSSG SEAAPCALAE TWNSSNGQQE ARTQLHEAYK  300
ARSYVNGSEQ FHNYSSFQAS SYALRSGERG DDGDCSGQQR GSISENQAAQ RRLAIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.28e-68NF-YA family protein