PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022944164.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 361aa    MW: 39212.9 Da    PI: 7.61
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022944164.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.34.4e-32186242158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep++VNaKQyq+Il+RRq+Rak+e e+kl +k rkpylheSRh+hA+rR+RgsgGrF
  XP_022944164.1 186 QEPVFVNAKQYQGILRRRQARAKAEVENKL-IKIRKPYLHESRHQHAMRRARGSGGRF 242
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MRSPLLRQAF PGLCSSSECH SKPRSVNQLE SEPPNMQQTS SYSEPWWRSI GYNQISPPAA  60
GGNLSNSTSL ECPNGASESN DGPSMSNDDL NEDDDDDTTK DSHAVSYGQV QNNSQHAVSA  120
APTVHGGCIT QPPQLELVGH SIACASNLYQ DPYYAGVMAA YGHQPGYPPF LGMPHARMAL  180
PLEVTQEPVF VNAKQYQGIL RRRQARAKAE VENKLIKIRK PYLHESRHQH AMRRARGSGG  240
RFAKKNEVNS SSSTMKNKDS GSGQAFSSHS AGSSGSEAAP CALAETWNSS NGQQEARTQL  300
HEAYKARSYV NGSEQFHNYS SFQASSYALR SGERGDDGDC SGQQRGSISE NQAAQRRLAI  360
K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.21e-71NF-YA family protein