PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022943898.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YB
Protein Properties Length: 201aa    MW: 20785.9 Da    PI: 6.3589
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022943898.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB185.44.3e-5822117297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     +eqdrflPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yveplk+yl+kyrelege
  XP_022943898.1  22 KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGE 116
                     89********************************************************************************************9 PP

           NF-YB  97 k 97 
                     k
  XP_022943898.1 117 K 117
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MAESDNESGG HNSNANSELS AKEQDRFLPI ANVSRIMKKA LPANAKISKD AKETVQECVS  60
EFISFITGEA SDKCQREKRK TINGDDLLWA MTTLGFEEYV EPLKTYLQKY RELEGEKSTM  120
GRQGEKDGSG GGGPSGSGAS GGVNSSTGGG GGVGGGGFNG VGGMYGGMMM MGHHQGGVYG  180
SSGGYHHMGI GGGKEGNSGS R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.12e-77NF-YB family protein