PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022943792.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 366aa MW: 40438 Da PI: 9.151

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022943792.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.8	1.2e-33	33	87	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_022943792.1 33 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 87 79****************************************************8 PP
2	Myb_DNA-binding	72.5	6.4e-23	35	86	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_022943792.1 35 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 86 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MFHTTKKPSS MTPHDRPMCV QGDSGLVLTT DPKPRLRWTV ELHERFVDAV TQLGGPDKAT 60 PKTIMRVMGV KGLTLYHLKS HLQKFRLGKQ PHKEFNDQSI KDGMRASAME LQRNSGSSST 120 LMERSMNEMQ LEVQRRLHEQ IEVQRHLQLR IEAQGKYMQS ILEKACQTLA GENMAVASTA 180 AGPFKTTSNN VGTTSTNLVP DTAIKDFISP HPPHTFPPFQ DMNNLFTSEP PPPPPPPLID 240 CLKKPSPFIS GAGKAPIFWP DDLRLQHLGT PSATLVPPPP SIGSPPDLDS LQLEMYESKP 300 PPLSPLLVGN DAINEKKFEA SVKLERPSPR QSSGHSDERV NNNNNGMPNN SNPTMSQPQG 360 RNSSFG

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MFHTTKKPSS MTPHDRPMCV QGDSGLVLTT DPKPRLRWTV ELHERFVDAV TQLGGPDKAT  60
PKTIMRVMGV KGLTLYHLKS HLQKFRLGKQ PHKEFNDQSI KDGMRASAME LQRNSGSSST  120
LMERSMNEMQ LEVQRRLHEQ IEVQRHLQLR IEAQGKYMQS ILEKACQTLA GENMAVASTA  180
AGPFKTTSNN VGTTSTNLVP DTAIKDFISP HPPHTFPPFQ DMNNLFTSEP PPPPPPPLID  240
CLKKPSPFIS GAGKAPIFWP DDLRLQHLGT PSATLVPPPP SIGSPPDLDS LQLEMYESKP  300
PPLSPLLVGN DAINEKKFEA SVKLERPSPR QSSGHSDERV NNNNNGMPNN SNPTMSQPQG  360
RNSSFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-108	G2-like family protein