PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022943618.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Dof

Protein Properties

Length: 338aa MW: 35956.8 Da PI: 10.3536

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022943618.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.7	6.2e-39	72	131	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++lkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+ XP_022943618.1 72 DATLKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 131 7789*****************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MNFSSIPAYL HPSNWQQQVS HQLGTTTTTT TTTSAPTSQL PPPPPPPPPH GGSIRPGSMA 60 ERARLANIPM PDATLKCPRC ESTNTKFCYF NNYSLTQPRH FCKTCRRYWT RGGALRNVPV 120 GGGCRRNKRS KGRNSKSPPV SSDRQQQTSG SANSSSSAIA SNNNSGLSPQ IPPLRFMAPL 180 HHHQQLTDFD IGGFNYGGGG GVLSAPATAA AAAGDLSFQL GNTNLAGGTS IGSLLGFDQQ 240 WRLQQQAPQF PFLSSLDPFD GGSSGGGDGS GWQMRPKLPS GSRNLTQMGN SVKMEGTPNH 300 EANIGRQFVG NEQYWSGGSM AWSDLSGFSS SSSTRNPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02460.1	6e-39	Dof family protein