PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022943360.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 289aa    MW: 31292.9 Da    PI: 4.3961
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022943360.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.00012264286223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C+ C++sF + s L++H +  H
  XP_022943360.1 264 SCKSCDRSFGSDSALQSHSKAkH 286
                     6*****************88777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MEFWGVEVKP GQALSVQPGD QKYLHLSQAT LGELKKDKAN ESVTIFVKIG DQKLVLGILS  60
AEKFPQLSFD LVFEKEFELS HNGKSGSIYC LGYQASAEDQ EHEEYSDSDF GSEDEELTLQ  120
PVQNGKPSQE EKSIAGKNSK KVEVKSLVPS KEEGDDDSED DDDSDEDEDS DDDSDEEMLG  180
ADSDSDDEDD GTESEEETPK KVESAKKRPN ESASKTPVSK KAKVASAEKT GSKKGGHTDT  240
PHPAKKPVKT PSKAETPKSA GQVSCKSCDR SFGSDSALQS HSKAKHGGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44750.27e-30C2H2 family protein