PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022943337.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 757aa    MW: 85765.9 Da    PI: 5.1479
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022943337.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS382.35.7e-1173827531374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+av+++d+++a++lL++++++asp gd +qRla+yf+ +L+arla+++s++yk l  ++ts    +++l+a++l+  ++P+ k+s+
  XP_022943337.1 382 LRTLLISCAQAVAADDHRNASELLKQVRQHASPFGDGNQRLASYFADGLEARLAGTGSQIYKGLINKRTS---AADVLKAYHLYLAACPFRKISN 473
                     6789************************************************************888888...89******************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +t N++ + a e+++++H+iDf+i +G+QWp+L+q L+ R++gpp+lRiTg++ p++g   +e++eetg+rLa +Ae+++vpfe+n+ +ak++e+
  XP_022943337.1 474 FTSNRTTMIASETATKLHVIDFGILYGFQWPTLIQRLSWRKGGPPKLRITGIEFPQPGfrPAERVEETGRRLAAYAETFNVPFEYNA-IAKKWET 567
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++e+L++++gE ++Vn+ ++ ++ll+esv++es+r++vL+l+ +++P++++    +  +n++ F++rf eal ++sa+fd+le+ +pre+ er+
  XP_022943337.1 568 ITVEDLNIDQGEFIVVNCLYRAKNLLEESVTTESPRNTVLRLIHKINPNLFITGVVNGAYNAPFFVTRFREALFHFSAIFDMLETVVPREDWERM 662
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +Ere++gre+ nv aceg er+er et+++W+ r+++aGF+++p+  ++ + a   +r  + + + ++e+s ++++gWk+r ++++SaW+
  XP_022943337.1 663 LLEREIFGREALNVTACEGWERVERPETYKQWQFRIMRAGFEQLPFHPEIFERAVEKVRSSYHRDFLIDEDSRWILQGWKGRIIYAISAWK 753
                     **************************************************************999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 757 aa     Download sequence    
MDPRLRRHGG SLNGILLDNG SFLVQSQEDG IGSIFQNTIM SHSFQEFNCL PPDPSPSNIA  60
SSSSVITSSS NDASHEEDYL EDCDFSDAVL TFINQILMEE DMEDKTCMLQ DSLDLQAAEK  120
PFYEVLGKKY PPSPEPNRSL GNQYSDSFNE ELCGDSSNYL IGYNNTSYYG DDNAFETQSG  180
DVFRIRSTLG DTISPSSNSS SNRIINEDDG WVDFSNNAIR VPEPNNRTQS IWQFQKGLEE  240
ASKFLPGGNN LCLDFEGNES ATQGLDEGTS QMYVKAARND QRKTSSLESR VRKNLHDEDG  300
DLEEERSSKQ AAISTESTLR SKMFDIVLLC SAGEGHDRLV SFRQELQNAK IKSMLQTGQL  360
KESNGGRGRR KKQSGKKEVV DLRTLLISCA QAVAADDHRN ASELLKQVRQ HASPFGDGNQ  420
RLASYFADGL EARLAGTGSQ IYKGLINKRT SAADVLKAYH LYLAACPFRK ISNFTSNRTT  480
MIASETATKL HVIDFGILYG FQWPTLIQRL SWRKGGPPKL RITGIEFPQP GFRPAERVEE  540
TGRRLAAYAE TFNVPFEYNA IAKKWETITV EDLNIDQGEF IVVNCLYRAK NLLEESVTTE  600
SPRNTVLRLI HKINPNLFIT GVVNGAYNAP FFVTRFREAL FHFSAIFDML ETVVPREDWE  660
RMLLEREIFG REALNVTACE GWERVERPET YKQWQFRIMR AGFEQLPFHP EIFERAVEKV  720
RSSYHRDFLI DEDSRWILQG WKGRIIYAIS AWKPTQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein