PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022943040.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 777aa    MW: 85120.4 Da    PI: 5.3789
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022943040.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS328.99.6e-1014167762374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      ++L+++Ae v +g+++ aq +Larl+++ sp g+p+qR+a+yf+eAL+  l+   ++ ++  pp+  ++ +++ ++ a+k+fse+sP+++f ++
  XP_022943040.1 416 LDQLYKAAELVGTGNFSHAQGILARLNHQLSPVGKPLQRAAFYFKEALQLLLLM--NNPVNPPPPRCPTPCDVIFKMGAYKVFSEISPLIQFVNF 508
                     679*************************************************98..6777788899999999*********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
                     t+Nqa+lea++  +r+Hi+Dfdi+ G+QW++++q+L+ R++g+psl+iT+++sp++++  el  ++++L++fA+ +g++fef+v+  ++l++   
  XP_022943040.1 509 TCNQALLEALDDVDRIHIVDFDIGFGAQWASFMQELSLRNQGAPSLKITAFASPSTHHPIELGLMRDNLTQFANDIGISFEFEVVNFDSLNQN-- 601
                     ************************************************************************************955555544.. PP

            GRAS 192 eeLrvkp...gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++L +++   +Ea+aVn+ l   +  ++++ l+s    +L+++k+lsPk+vv  ++ +d+++ +F +++l+al+ y  l++sl+a    +s++ +
  XP_022943040.1 602 SSLPFSRaseNEAIAVNFPL--WSSSNQPAMLPS----LLRFIKQLSPKIVVSLDRGCDRSDLPFPQHMLQALQSYINLLESLDAI-NMNSDAIN 689
                     5665555556*******999..555556777777....*********************************************887.7899**** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     k+Er+ll+++i++ v  + +      e++  W+  + +aG+ pv++s+++++qa+++ ++++++g++ve++++slv++W++r+L+s+SaWr
  XP_022943040.1 690 KIERFLLQPRIESTVLGRLRV----PERMPLWKTLFASAGYMPVTFSNFTETQAECVAKRTSVRGFHVEKRQASLVFCWQRRELISASAWR 776
                     ***************998887....9999*************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 777 aa     Download sequence    
MRGIPFQFQG KGELEISAAF SSPICSGFAQ KWVKKGEQQQ QQQEAEEEQE EGLSYFVLPN  60
NEPTSVLHMR SPSPPTSAST LSSSFGGGGA GGGCVPSFPP ETPSVEPLPG AGVGTPIFPG  120
GLERCGVGLE DLESMWTESA GPEQSFLRWI AGDVVEDPSL GIKTVLQNGN IPFDMDSNGS  180
MGIVDQGSEF DPAAAAAAAA AAAGNVLSNI NPNLSFPVPA ACTGFSDVNG SNNKPFSRTT  240
YKSSCLGLNN RHGNFNVQNP IFSGSVENLV VPVSAMIYPP QLPPFEAPDE KPQNLNAQVL  300
LNQHQQHPQN PSFFVPLAFG QPEQQLQLQL KRHNSSGGVD PNGAIPKVPF MDPGNEMFLR  360
NHQQVLQQQQ QLGYPLGLQF LPQQKAMSPK PKVIGHGDDE TAYQNPPQQQ QQHALLDQLY  420
KAAELVGTGN FSHAQGILAR LNHQLSPVGK PLQRAAFYFK EALQLLLLMN NPVNPPPPRC  480
PTPCDVIFKM GAYKVFSEIS PLIQFVNFTC NQALLEALDD VDRIHIVDFD IGFGAQWASF  540
MQELSLRNQG APSLKITAFA SPSTHHPIEL GLMRDNLTQF ANDIGISFEF EVVNFDSLNQ  600
NSSLPFSRAS ENEAIAVNFP LWSSSNQPAM LPSLLRFIKQ LSPKIVVSLD RGCDRSDLPF  660
PQHMLQALQS YINLLESLDA INMNSDAINK IERFLLQPRI ESTVLGRLRV PERMPLWKTL  720
FASAGYMPVT FSNFTETQAE CVAKRTSVRG FHVEKRQASL VFCWQRRELI SASAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-123GRAS family protein