PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022942999.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 938aa MW: 106401 Da PI: 8.7994

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022942999.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	156.7	9.8e-49	46	171	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + +++ XP_022942999.1 46 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTED 139 79*************************.89***********8778899************************************* PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +glkktLvfy+g+apkg +t+W+m+eyrl XP_022942999.1 140 FRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRL 171 ****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 938 aa Download sequence
MAIAAAASSS STMSHEEISS SNNTHNKNDD DNNNCSDDQH EHDVVMPGFR FHPTEEELVE 60 FYLRRKVEGK RFNVELITFL DLYRYDPWEL PALAAIGEKE WFFYVPRDRK YRNGDRPNRV 120 TTSGYWKATG ADRMIRTEDF RSIGLKKTLV FYSGKAPKGI RTSWIMNEYR LPHHETERYQ 180 KTEISLCRVY KRAGVEDHPS LPRSLPSRAS SSSSSTSAIV SSTKWVLKLA MWVIFSVWMV 240 VIFLYPSSFA SHLFSEWFGA SGQTLFGITG AIFLTFSAPL LAIAILAAVY LIISRDDQPY 300 ERKKKKKNGK EKPRWRLWTL PVLVEGPLEV VTAAELVGIL VVLGYVFWAI YSYTLRMLAT 360 DFSRNLTFLQ ISCEVLEVMG LRLGSMGLFC LGFLFLPISR GSVLLRLIDI PFEHATRYHV 420 WLGHLTMLIF TLHGLAFVIQ WLIQGRCIEQ LLEWKDIGIA NLPGVISLLA GLLMWITSLP 480 KLRTINFELF FYTHQLYIVF VLFLALHVGD FVFSIAAGGI FIFMLDRFLR FIQSRRTVDV 540 ISAKALPCGT VELIISKPRS LRYNALSFIF LQVRELSLLQ WHPFSVSSSP LEGEDRLAIL 600 IKVLGKWTEK LRGKILNDKA KEISSDKHQS VMTVSVEGPY GHESPYHLMY ENLILVAGGI 660 GISPFLAILS DILHRIRDGK PCLPKKILVV WAIKNSSELP LLSTLNVDSI CPFFADKLNI 720 DISIYVTRQS QPPPEGEIQP SKVTSICPLS KGCNMSVLVG TGDNVWSGLY VISSTVGLVI 780 LVSLMDFYYI NPFNIKKWWY KGLLFFLCMV ASVVLFGGLV VCLWSLWEEH ISSKRTTHHN 840 VNDIEKVGED IPKDTLAQKD LNPKAFANST TIEYGTRPNF DEIVESVAEN WGKVDIGVLI 900 CGPSTLQSSV AKAIRSHNMV RRRAHHPIFH FHSHSFDL

Sequence ? help Back to Top

Protein Sequence Length: 938 aa Download sequence

MAIAAAASSS STMSHEEISS SNNTHNKNDD DNNNCSDDQH EHDVVMPGFR FHPTEEELVE  60
FYLRRKVEGK RFNVELITFL DLYRYDPWEL PALAAIGEKE WFFYVPRDRK YRNGDRPNRV  120
TTSGYWKATG ADRMIRTEDF RSIGLKKTLV FYSGKAPKGI RTSWIMNEYR LPHHETERYQ  180
KTEISLCRVY KRAGVEDHPS LPRSLPSRAS SSSSSTSAIV SSTKWVLKLA MWVIFSVWMV  240
VIFLYPSSFA SHLFSEWFGA SGQTLFGITG AIFLTFSAPL LAIAILAAVY LIISRDDQPY  300
ERKKKKKNGK EKPRWRLWTL PVLVEGPLEV VTAAELVGIL VVLGYVFWAI YSYTLRMLAT  360
DFSRNLTFLQ ISCEVLEVMG LRLGSMGLFC LGFLFLPISR GSVLLRLIDI PFEHATRYHV  420
WLGHLTMLIF TLHGLAFVIQ WLIQGRCIEQ LLEWKDIGIA NLPGVISLLA GLLMWITSLP  480
KLRTINFELF FYTHQLYIVF VLFLALHVGD FVFSIAAGGI FIFMLDRFLR FIQSRRTVDV  540
ISAKALPCGT VELIISKPRS LRYNALSFIF LQVRELSLLQ WHPFSVSSSP LEGEDRLAIL  600
IKVLGKWTEK LRGKILNDKA KEISSDKHQS VMTVSVEGPY GHESPYHLMY ENLILVAGGI  660
GISPFLAILS DILHRIRDGK PCLPKKILVV WAIKNSSELP LLSTLNVDSI CPFFADKLNI  720
DISIYVTRQS QPPPEGEIQP SKVTSICPLS KGCNMSVLVG TGDNVWSGLY VISSTVGLVI  780
LVSLMDFYYI NPFNIKKWWY KGLLFFLCMV ASVVLFGGLV VCLWSLWEEH ISSKRTTHHN  840
VNDIEKVGED IPKDTLAQKD LNPKAFANST TIEYGTRPNF DEIVESVAEN WGKVDIGVLI  900
CGPSTLQSSV AKAIRSHNMV RRRAHHPIFH FHSHSFDL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	301	307	ERKKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.2	1e-102	NAC family protein