PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022942910.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | DBB | ||||||||
Protein Properties | Length: 274aa MW: 30531.7 Da PI: 6.5672 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 22.4 | 2.5e-07 | 4 | 47 | 5 | 42 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC C +++H H++vpl XP_022942910.1 4 QCNVCEMAEATVLCCADEAALCWACDENIHAAnklaskHQRVPL 47 7******99*********************66899999999986 PP | |||||||
2 | zf-B_box | 29.7 | 1.4e-09 | 52 | 95 | 1 | 38 |
zf-B_box 1 seerkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 s++++C+ ++e +fC +++ llC++C +++H H+ XP_022942910.1 52 SQMPRCDICQEASGYIFCLEDRALLCRKCDVAIHTAnayvtgHQ 95 689*******************************5455666665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MKIQCNVCEM AEATVLCCAD EAALCWACDE NIHAANKLAS KHQRVPLSGS SSQMPRCDIC 60 QEASGYIFCL EDRALLCRKC DVAIHTANAY VTGHQRFLLT GVKVALEPTD PVPCSSIANS 120 HSREISTKTK VRPPSDKEFS MPSSGELSRS LSVQGGSDDF MTNRTLLTGD SASGGFSQWQ 180 IDELINLTGF NQNYGFMDNG SSKLGCFSAY IHYTTFKIDR DWRETELILR HDTLVMGEFL 240 HVMILSYPHR LTAKKWTDWR LIVESLGTPT HHQV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78600.1 | 2e-75 | DBB family protein |