PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022942688.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB_related | ||||||||
Protein Properties | Length: 365aa MW: 39292.8 Da PI: 10.6214 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.4 | 1.8e-14 | 110 | 155 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT+eE+ ++ + k+lG+g+W+ I++ + ++Rt+ q+ s+ qky XP_022942688.1 110 KPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKY 155 58*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 365 aa Download sequence |
MVRESPRKCS HCGLNGHNSR TCSNFAKGNN NNNYCVKLFG VNLMDNGDES MRKSLSMGNL 60 NIHVCNHNAA AAGNNVACYN AAVADDGGYL SDGLIHNKKR KAALERKKGK PWTEEEHRTF 120 LAGLKKLGKG DWRGISKNFV TTRTPTQVAS HAQKYFLRKM NANDKKKRRA SLFDIPEIKN 180 NVSQECQASS SSMRANGETS QILLPKNSSE NQQQVSNLPT QLINRFPHLC LDTPHFVPST 240 TGSPASGVAN LHGIPYVVGV SPNNVPIIPL VKLGRRSSAV MAMPKSPIRT SSPNAAAAAA 300 ALVAHPSGIP PSPRSSPQRP LMVQLQASAM AASFETDALE LKIGLPQSPQ AKNLSSQTSG 360 AIRVI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 165 | 169 | KKKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61620.1 | 5e-61 | MYB_related family protein |