PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022942663.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 549aa MW: 58850.1 Da PI: 9.2577

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022942663.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.3	2.8e-05	60	82	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_022942663.1 60 FICEVCNKGFQREQNLQLHRRGH 82 89*******************88 PP
2	zf-C2H2	12.6	0.00041	136	158	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ XP_022942663.1 136 WKCDKCSKRYAVQSDWKAHSKTC 158 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 549 aa Download sequence
MAASSSSSLP VYGVGEESTP QMRPPSNSST KKKRNQPGTP NPDAEVIALS PKTLMATNRF 60 ICEVCNKGFQ REQNLQLHRR GHNLPWKLKQ KSTKDPKRKV YLCPEPTCVH HHPSRALGDL 120 TGIKKHYSRK HGEKKWKCDK CSKRYAVQSD WKAHSKTCGT REYRCDCGTL FSRRDSFITH 180 RAFCDALAQE SARHPPSIGR HLYGAQDHPN IISQSAPGHF THLLPSSMGS SFRPMSASGF 240 FLTEQNNQSS FHEDQPNQSQ QGFFGNKGFH GVMQFPDMQS HTNNCASNVF NLGFIPNSTT 300 DGTTNLNNNN DTNTISTNLN QFSAANNGNN EAAASNIFAV IGDQMNSAAL PSLYSNASAV 360 GGGGGSGIGG LFPHMSATAL LQKAAQLGST TSGSNTTSTL LRSFGSSSNS GGKVSDRTLF 420 PLGYGGVTFG EHESNLQDMM NSFGSGSSGS GMFGSGMNSF GGLECSSSRT NMETLEDPKL 480 QQDVRGVRMG GTDRLTRDFL GVGQIVRSMS GGGGGYSQKQ GAEGMVLEGN ERNSAPSSQG 540 FGGGNGNYQ

Sequence ? help Back to Top

Protein Sequence Length: 549 aa Download sequence

MAASSSSSLP VYGVGEESTP QMRPPSNSST KKKRNQPGTP NPDAEVIALS PKTLMATNRF  60
ICEVCNKGFQ REQNLQLHRR GHNLPWKLKQ KSTKDPKRKV YLCPEPTCVH HHPSRALGDL  120
TGIKKHYSRK HGEKKWKCDK CSKRYAVQSD WKAHSKTCGT REYRCDCGTL FSRRDSFITH  180
RAFCDALAQE SARHPPSIGR HLYGAQDHPN IISQSAPGHF THLLPSSMGS SFRPMSASGF  240
FLTEQNNQSS FHEDQPNQSQ QGFFGNKGFH GVMQFPDMQS HTNNCASNVF NLGFIPNSTT  300
DGTTNLNNNN DTNTISTNLN QFSAANNGNN EAAASNIFAV IGDQMNSAAL PSLYSNASAV  360
GGGGGSGIGG LFPHMSATAL LQKAAQLGST TSGSNTTSTL LRSFGSSSNS GGKVSDRTLF  420
PLGYGGVTFG EHESNLQDMM NSFGSGSSGS GMFGSGMNSF GGLECSSSRT NMETLEDPKL  480
QQDVRGVRMG GTDRLTRDFL GVGQIVRSMS GGGGGYSQKQ GAEGMVLEGN ERNSAPSSQG  540
FGGGNGNYQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02080.1	1e-118	C2H2 family protein