PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022942373.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Nin-like

Protein Properties

Length: 904aa MW: 99952.9 Da PI: 7.5329

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022942373.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.3	7.1e-29	504	555	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isl++l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ XP_022942373.1 504 AEKSISLDVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 555 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 904 aa Download sequence
MMARIPNLLP MLALFLLRAG TSNLNSVPQK PIENHKFKIL PVPSENPDGY CLIKEKMAQA 60 LRYIKDLSDQ QVLAQVWAPV KNGDKVVLST SGQPFVLDTQ SNGLHRYRLV SLTYMFSLDT 120 ELDGSLGLPG RVFQQKLPEW TPNVQYYSSK EYSRLRHALD YNVQGTLALP VFDPSGQSCL 180 GVLELIMTSP RINYAPEVDK VCKALQAVNL KSSEILDRPN IQICNEGRQN ALAEILAVLT 240 VVCETHNLPL AQTWVPCRHR NVLANGGGLK KSCTSFDGSC MGRICMSATE VASYVVDAHK 300 WGFREACLEH HLQKGQGVSG RAFSSHSSCF CGDITQFCKN EYPLVHYALM FGLKSCFSIC 360 LRSKFTGDDE YILEFFLPPS LVDYQEQKTL LGAMMATMKQ HFYTLKVASG IKLEEGGIVE 420 VVQASRNGGF ESRLECIHIP PESDAMPNTG EVAALETLQQ RSLMVHDAPK DENNTVRDRE 480 SDNPVPCVQN KEVKKTSKRK RGKAEKSISL DVLQQYFAGS LKDAAKSLGV CPTTMKRICR 540 QHGISRWPSR KINKVNRSLS KLKRVIDSVQ GNEGTFGMSS LATSPLPVAV SSSSHPLTPD 600 GSNQNFFFAS QPSDPQRKET NTSEAQTNNT QARLKDQLLR GVSNPEELFH EQNGSLMKLG 660 NGFNNFRTGS GSRDESTGTP TSHGSCQGSP ANESNPLSIH HQEQCVRRGS PEAAAFHPID 720 KPNTSTRACP VPDTLLMVEP KEPFGGMLIK DAGSSKDLKN LCASVADAVL DDQVPKFCWP 780 RPSDIAMRQP MESVCHTVPH ISARQEPSRM TIKATYKDDI IRFQISTCTG IVELQEEVAK 840 RLKLDIGTFD IKYMDDDREW VLTACDADLQ ECVDISKASG SNIIRLLVHD LSVNLGSSCE 900 STRE

Sequence ? help Back to Top

Protein Sequence Length: 904 aa Download sequence

MMARIPNLLP MLALFLLRAG TSNLNSVPQK PIENHKFKIL PVPSENPDGY CLIKEKMAQA  60
LRYIKDLSDQ QVLAQVWAPV KNGDKVVLST SGQPFVLDTQ SNGLHRYRLV SLTYMFSLDT  120
ELDGSLGLPG RVFQQKLPEW TPNVQYYSSK EYSRLRHALD YNVQGTLALP VFDPSGQSCL  180
GVLELIMTSP RINYAPEVDK VCKALQAVNL KSSEILDRPN IQICNEGRQN ALAEILAVLT  240
VVCETHNLPL AQTWVPCRHR NVLANGGGLK KSCTSFDGSC MGRICMSATE VASYVVDAHK  300
WGFREACLEH HLQKGQGVSG RAFSSHSSCF CGDITQFCKN EYPLVHYALM FGLKSCFSIC  360
LRSKFTGDDE YILEFFLPPS LVDYQEQKTL LGAMMATMKQ HFYTLKVASG IKLEEGGIVE  420
VVQASRNGGF ESRLECIHIP PESDAMPNTG EVAALETLQQ RSLMVHDAPK DENNTVRDRE  480
SDNPVPCVQN KEVKKTSKRK RGKAEKSISL DVLQQYFAGS LKDAAKSLGV CPTTMKRICR  540
QHGISRWPSR KINKVNRSLS KLKRVIDSVQ GNEGTFGMSS LATSPLPVAV SSSSHPLTPD  600
GSNQNFFFAS QPSDPQRKET NTSEAQTNNT QARLKDQLLR GVSNPEELFH EQNGSLMKLG  660
NGFNNFRTGS GSRDESTGTP TSHGSCQGSP ANESNPLSIH HQEQCVRRGS PEAAAFHPID  720
KPNTSTRACP VPDTLLMVEP KEPFGGMLIK DAGSSKDLKN LCASVADAVL DDQVPKFCWP  780
RPSDIAMRQP MESVCHTVPH ISARQEPSRM TIKATYKDDI IRFQISTCTG IVELQEEVAK  840
RLKLDIGTFD IKYMDDDREW VLTACDADLQ ECVDISKASG SNIIRLLVHD LSVNLGSSCE  900
STRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein