PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022942290.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

FAR1

Protein Properties

Length: 808aa MW: 93809.9 Da PI: 8.1083

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022942290.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	86.1	5.5e-27	47	132	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+eYAk++GF++++++s++sk+++e+++++f Cs++g + e+++ ++r+ ++++t+Cka+++vk++ dg+w ++++ ++HnHe+ XP_022942290.1 47 FYQEYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGVTPESENG---NSRRPSVKKTDCKASMHVKRRPDGRWIIHEFIKDHNHEFL 132 *************************************9999877...7888899*****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 808 aa Download sequence
MVDVVAEMHD RDDGIVSLPK DILFEGDIDF EPRSGIEFES HEAAYTFYQE YAKSMGFTTS 60 IKNSRRSKKS KEFIDAKFAC SRYGVTPESE NGNSRRPSVK KTDCKASMHV KRRPDGRWII 120 HEFIKDHNHE FLPALAYHFR IHRNVKLAEK NNIVILHAVS ERTRRMYVEM SKKRGVYRNV 180 GFPQIDTTYQ FNKGQYLALD EGDAQVLLEY FKRIQKENPY FFYAIDLNEE QRLRNLFWVD 240 AKSRNDYVSF SDVVSFXISY IKTNDKLPFA PFIGVNHHGQ SMVLGCALAA DCTKPTFTWL 300 LKTWLRAMDG QAPKVIITDQ DKALKLAIEE VFPNTRHCFA LWHIMEKIPE TLAHVIKRHK 360 NFLSKFSKCI LKSWTDEQFD MRWWKMVTRF ELQDDKWIQS LYDDRRKWVP TYMEEIFLAG 420 MSTAQRSDST NAFFDKYIHK KITLKEFLKQ YGNILQNRYE EETIADFDTL HKQPALKSPS 480 PWEKQMSTIY THTIFKKFQV EVLGVVGCHP RKESEDGGIT TFRVLDCEKD EHFLVKWHEL 540 NSEVSCFCRL FEYNGFLCRY ALIVLHMHRF SSIPPQYLLR RWTKDAKSRQ ANTTEGTEFR 600 QNRVQRYNNL CKKAIELSEE GSQSEECYNI VIRALVEALK NCVNINNSKS APAESSVNGY 660 GVREEEENQE SIAAKANKRS TNRKRKVQTE TAMILDESQN NLQQMDGLTS DSMTLSGYYG 720 SQQNVQGLVQ LNLMEPPHDA SYYVNQQSIQ GLGQLNTIAA SQDGFFGAQH NGIHALVDYR 780 PATSHSYSLQ DEQHLRSAQL HGSTSGHT

Sequence ? help Back to Top

Protein Sequence Length: 808 aa Download sequence

MVDVVAEMHD RDDGIVSLPK DILFEGDIDF EPRSGIEFES HEAAYTFYQE YAKSMGFTTS  60
IKNSRRSKKS KEFIDAKFAC SRYGVTPESE NGNSRRPSVK KTDCKASMHV KRRPDGRWII  120
HEFIKDHNHE FLPALAYHFR IHRNVKLAEK NNIVILHAVS ERTRRMYVEM SKKRGVYRNV  180
GFPQIDTTYQ FNKGQYLALD EGDAQVLLEY FKRIQKENPY FFYAIDLNEE QRLRNLFWVD  240
AKSRNDYVSF SDVVSFXISY IKTNDKLPFA PFIGVNHHGQ SMVLGCALAA DCTKPTFTWL  300
LKTWLRAMDG QAPKVIITDQ DKALKLAIEE VFPNTRHCFA LWHIMEKIPE TLAHVIKRHK  360
NFLSKFSKCI LKSWTDEQFD MRWWKMVTRF ELQDDKWIQS LYDDRRKWVP TYMEEIFLAG  420
MSTAQRSDST NAFFDKYIHK KITLKEFLKQ YGNILQNRYE EETIADFDTL HKQPALKSPS  480
PWEKQMSTIY THTIFKKFQV EVLGVVGCHP RKESEDGGIT TFRVLDCEKD EHFLVKWHEL  540
NSEVSCFCRL FEYNGFLCRY ALIVLHMHRF SSIPPQYLLR RWTKDAKSRQ ANTTEGTEFR  600
QNRVQRYNNL CKKAIELSEE GSQSEECYNI VIRALVEALK NCVNINNSKS APAESSVNGY  660
GVREEEENQE SIAAKANKRS TNRKRKVQTE TAMILDESQN NLQQMDGLTS DSMTLSGYYG  720
SQQNVQGLVQ LNLMEPPHDA SYYVNQQSIQ GLGQLNTIAA SQDGFFGAQH NGIHALVDYR  780
PATSHSYSLQ DEQHLRSAQL HGSTSGHT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein