PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022942288.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

FAR1

Protein Properties

Length: 846aa MW: 97353.2 Da PI: 7.2219

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022942288.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80.8	2.4e-25	88	190	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............tekerrtraetrtgCkaklkvkkekdgkwevtklel 83 +fY+eYA+++GF++ +++s++sk+++e+++++f Cs++g ++e +k+ +e++ +ra +t+Cka+++vk++ dgkw+++++ + XP_022942288.1 88 SFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGMKREYDKSfnrprirqtkqeSENSTGRRACAKTDCKASMHVKRRADGKWVIHSFFK 182 5******************************************99**9977555555559999********************** PP FAR1 84 eHnHelap 91 HnHel p XP_022942288.1 183 LHNHELLP 190 ***975 PP

Sequence ? help Back to Top
Protein Sequence Length: 846 aa Download sequence
MDIDLRLPSG EHDKDEESNA INNMLDVKEK LHNGVIGSGS MVDTTEGMHI EDGGDSKPPL 60 LDMVMFKEDT NLEPLPGMEF ESHSEAYSFY QEYARSMGFN TAIQNSRRSK TSREFIDAKF 120 ACSRYGMKRE YDKSFNRPRI RQTKQESENS TGRRACAKTD CKASMHVKRR ADGKWVIHSF 180 FKLHNHELLP AQAVSEQTRK MYAAMARQFA EYKNVVGLKN DSKNPFDKVC SLAFEAGDAR 240 VLLDFFTQMQ NLNSNFFYAV DIGEDHRLRN LFWIDAKSRH DYIYFNDVVS LDTTYIRNKY 300 KMPLAFFVGV NQHYQFMLLG CALLSDTSPA TYAWLLRTWL KAIGGQAPKV VITDHDKVLK 360 SLIPEVLPNV YHHFTLWHIL GKLSENLGNV MKQHDNFMAK FEKCIYRSWT KEEFEKRWWK 420 LVNRFELKEN ELVQSLCEDL RHWAPTYMTD VFLAGMSTAQ RSESVNSFLD KYLHKKTTVQ 480 EFVKQYEAVL QDRYEEEAKA DFDTWNKQPT LKSPSPFEKN VSGLYTHAVF KKFQVEVLGA 540 VACHPRREKQ DDENITYHVQ DLDKKLDFIV VWNELKSEVS CLCRLYESKG YLCRHAMIVL 600 QICELSTIPP QYILKRWTKD AKSHQLMGEE PEPGQSRVHR YNDLCQRALR LIEEGSLYRE 660 SYSIAVHALD ETLGHCIGIN SSNRTVLEAG TSAAHGLLCI EDDNQIRNIG KTNKKKNPTK 720 KRKVNFESDV MTVGAQDSLQ QMDKLSSRAV TLDGYFGTQP SVQGMVQLNL MAPTRDNYYG 780 NQQAIGGLGQ LDSIAPSHDG YYADQQSIHA LGQMDFFRTP TGFTYGIRDD PNVRTTQLHD 840 DASRQT

Sequence ? help Back to Top

Protein Sequence Length: 846 aa Download sequence

MDIDLRLPSG EHDKDEESNA INNMLDVKEK LHNGVIGSGS MVDTTEGMHI EDGGDSKPPL  60
LDMVMFKEDT NLEPLPGMEF ESHSEAYSFY QEYARSMGFN TAIQNSRRSK TSREFIDAKF  120
ACSRYGMKRE YDKSFNRPRI RQTKQESENS TGRRACAKTD CKASMHVKRR ADGKWVIHSF  180
FKLHNHELLP AQAVSEQTRK MYAAMARQFA EYKNVVGLKN DSKNPFDKVC SLAFEAGDAR  240
VLLDFFTQMQ NLNSNFFYAV DIGEDHRLRN LFWIDAKSRH DYIYFNDVVS LDTTYIRNKY  300
KMPLAFFVGV NQHYQFMLLG CALLSDTSPA TYAWLLRTWL KAIGGQAPKV VITDHDKVLK  360
SLIPEVLPNV YHHFTLWHIL GKLSENLGNV MKQHDNFMAK FEKCIYRSWT KEEFEKRWWK  420
LVNRFELKEN ELVQSLCEDL RHWAPTYMTD VFLAGMSTAQ RSESVNSFLD KYLHKKTTVQ  480
EFVKQYEAVL QDRYEEEAKA DFDTWNKQPT LKSPSPFEKN VSGLYTHAVF KKFQVEVLGA  540
VACHPRREKQ DDENITYHVQ DLDKKLDFIV VWNELKSEVS CLCRLYESKG YLCRHAMIVL  600
QICELSTIPP QYILKRWTKD AKSHQLMGEE PEPGQSRVHR YNDLCQRALR LIEEGSLYRE  660
SYSIAVHALD ETLGHCIGIN SSNRTVLEAG TSAAHGLLCI EDDNQIRNIG KTNKKKNPTK  720
KRKVNFESDV MTVGAQDSLQ QMDKLSSRAV TLDGYFGTQP SVQGMVQLNL MAPTRDNYYG  780
NQQAIGGLGQ LDSIAPSHDG YYADQQSIHA LGQMDFFRTP TGFTYGIRDD PNVRTTQLHD  840
DASRQT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	0.0	FAR1 family protein