PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022942116.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family AP2
Protein Properties Length: 338aa    MW: 37149 Da    PI: 8.8545
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022942116.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.23.6e-17136185155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  XP_022942116.1 136 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 185
                     78*******************......55************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MLNLNDLIIN CDETSTNRTV MEDSETSNSS VVNADEVCNS RDEDSSVLIF NILKRENSGG  60
GGGGASRELV TQALFPVAGG WGETGSPVPK SHWLNLSSTG DFGGEGVGGG TAELKIVQQK  120
QQQVRKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA  180
IKFRGVNADI NFNISDYDED MKQLKNLSKE EFVHVLRRQS TGFSRGGSKL RGLSLQKYGR  240
WETQTSPLMT KNEIEERSTM VDANNGGNGH NLDLSIGGIF NYHLRNSSQN LNIQTPKKEN  300
NGGGGYGVGG QQPHIPPMWS GFCSGFLADN QTNKNQTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.26e-57AP2 family protein