PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022941893.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 717aa    MW: 80062.1 Da    PI: 6.0776
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022941893.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.51.8e-06122142627
                     -SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   6 CrffartGtCkyGdrCkFaHgp 27 
                     C ff++ G C  GdrC F Hgp
  XP_022941893.1 122 CIFFQK-GLCLKGDRCAFLHGP 142
                     ******.*************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 717 aa     Download sequence    
MVGGGPQVLE QPQQSLPQPL STAEEEAVKR NTDCVYFLAS PLTCKKGSEC EYRHSEYARV  60
NPRDCWFWLN GNCLNPKCSF RHPPLDGLVG TPHSTTPSSQ IPSQTSAIPS APVNSSKQAV  120
SCIFFQKGLC LKGDRCAFLH GPSPVPTNKV PLMATNGQAS EPPSVKKIAG GTQRSNQEQK  180
NPQEIFLKSV GDASVKLAMK DGSVPSKIGN INEKSRPPAK VADGGSRYKA TKSLPILNES  240
SLSRGNRLQQ SHVIDDHGLQ NGKDADEFLK ESSPGFDVLV DDELRGSGYY GSEEQYGRTR  300
GHDGANMISM NDYDISHSAD YKMMANVDHD VYNDVTDYDY DTRKGQYGWD QRWTSSEKLS  360
LGSAQMERRL SRKSISPEHV QNVDLRHRLN KQRRGNGLRS VINNENVGNR PEERNYHASR  420
RDSHPSQESS MSNRLRGRIK LPRIPSPVRS SNVGPERDFN RGRSGGRLSP GRSLSLSYQE  480
SSRDEMKGRL EVDYNNERRN FNGLNSGRDG MDGTSDFAAP KRLAELKGEK HVVSKEKQTL  540
GKRKGFDNDQ PGVELSFEGP KSLSEILRKK RQVKSAVDLP MNNAERESSE RLKERSIIPS  600
VEQGGRSSTS KQKANSLEGI VFAPVETFGK EEENINVTHH NSSQPIHSTD DHGIEAYEET  660
FEDPEYEGDD LRDGEYEYEE VDDREYNYEE GDNVVPEEEY MDDEDGDDFA KKIGVMS