PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022941688.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 332aa    MW: 37291.2 Da    PI: 5.4525
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022941688.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.61.9e-10555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT +E+  l+ +v ++G g W+tI +          R+  ++k++w++
   XP_022941688.1  5 KQKWTNQEETALKAGVVKHGAGKWRTILKDPEfsdvlYLRSNVDLKDKWRN 55
                     79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MGAPKQKWTN QEETALKAGV VKHGAGKWRT ILKDPEFSDV LYLRSNVDLK DKWRNMSVMA  60
NGWGSREKAR LALKRSHAPK KDESIVAQGI AVQSEDEFPE AKTVSLSLDI KQIAGPKQSN  120
VRKEEEEEDE EEEEEEEEEE KEVERTERDA MYDCHRLDNL IIEAISTLRE RSGSIKNSIA  180
LYIEGQYWAP PDFKRLLSSK LKFLTASGKL VKVKRRYRLA STVSSCERRG SMLLLDDQHR  240
ASMRDNRDEM CTLAKAQMDL ELAKMRTMTS QEAAAVAARA VAEAEAAIAE AEEAAREAEA  300
AEADAAAAQS FAEAAMKTLK GRNLPKMQMV RV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.18e-73MYB_related family protein