PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022941615.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | bHLH | ||||||||
Protein Properties | Length: 429aa MW: 46386.2 Da PI: 6.9202 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 17.8 | 6.1e-06 | 316 | 354 | 11 | 54 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L XP_022941615.1 316 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 354 5778999**********998.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 429 aa Download sequence |
MAEEFQSSGN WWDATRSRYE AGISPSSSAI TTFVDHPDSG AGAGDPNLHI MGLGLDWNQP 60 LFRGGGEKAA ESSFRSMLQP DNMNLNMQET GQHHQHQQQQ IQWMRSEKLY SGESPATEFK 120 PINRGFSLDH HNQPPPQFSP SHYSTGDSTI TSFPLDTAAA AAALYGNSTT LLQGLLAGGG 180 SEQQQVSGAG MNFPYNTHFG MNSSELMAAA SWSNSKVPPF LRNSPPKGAA PTPPQSQLQF 240 SNNTAFWNAS DMKDARASYI PASYNAAALA GDKSKSRSEG GKKSGNDQNQ QQTGGGGGAV 300 KRPRNETAPG LPAFKVRKEK MGDRITALQQ LVSPFGKTDT ASVLSEAIEY IKFLHEQVSV 360 LSTPYLKSGG GAVVQQQQQK WCEKRTEGEG KEEDLRSRGL CLVPVSSTFP VTHETTVDFW 420 TPSFGGTFR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20640.1 | 5e-61 | bHLH family protein |