PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022941148.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TALE

Protein Properties

Length: 368aa MW: 41958.8 Da PI: 6.0253

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022941148.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.8	2.1e-09	295	330	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+++q+ +WF N+R ++ XP_022941148.1 295 YKWPYPSETEKVALAESTGLDQKQINNWFINQRKRH 330 5679*****************************885 PP
2	ELK	31.1	5.1e-11	250	271	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++LlrKYsg L+sLkqE+s XP_022941148.1 250 ELKNHLLRKYSGFLSSLKQELS 271 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MEDYNNHLNE NSNPRGNFLY ASANSSSGNY GRSSNPTAQM PAHTFHLQQG ADCFQADQSH 60 PIVKSEASTS HHQLLKFHYS LGQPPPPPPT TTTTCRPDDD GGVDVEAIKA KIMAHPQYSS 120 LLEAYMECQK VGAPPQVVEQ LVAARQEFEA RQRSSMVSGD STKDPELDQF MEAYYDMLVK 180 YREELTRPVQ EAMDFMRRIE SQLSSLCNGP VRIFNSDEKC EGIGSSEEEQ ENSGGETELP 240 EIDPRAEDRE LKNHLLRKYS GFLSSLKQEL SKKKKKGKLP KDARQKLLNW WELHYKWPYP 300 SETEKVALAE STGLDQKQIN NWFINQRKRH WKPSEDMQFM VMDGLHPSNA ALYLDGHYMT 360 DGHYRLGP

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MEDYNNHLNE NSNPRGNFLY ASANSSSGNY GRSSNPTAQM PAHTFHLQQG ADCFQADQSH  60
PIVKSEASTS HHQLLKFHYS LGQPPPPPPT TTTTCRPDDD GGVDVEAIKA KIMAHPQYSS  120
LLEAYMECQK VGAPPQVVEQ LVAARQEFEA RQRSSMVSGD STKDPELDQF MEAYYDMLVK  180
YREELTRPVQ EAMDFMRRIE SQLSSLCNGP VRIFNSDEKC EGIGSSEEEQ ENSGGETELP  240
EIDPRAEDRE LKNHLLRKYS GFLSSLKQEL SKKKKKGKLP KDARQKLLNW WELHYKWPYP  300
SETEKVALAE STGLDQKQIN NWFINQRKRH WKPSEDMQFM VMDGLHPSNA ALYLDGHYMT  360
DGHYRLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-130	TALE family protein