PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022940954.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 356aa MW: 39934.3 Da PI: 7.6728

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022940954.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.8	1e-53	52	180	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhP+deelv++yL +k+ + +++ ++ + evd++k+ePwd+p+++ + kewyfFs+rd+kyatg r+nrat+sgyWkatgkd+++++k XP_022940954.1 52 LPPGFRFHPRDEELVCDYLINKIGSVPHSSSSLFIEVDLNKCEPWDIPREACVGGKEWYFFSQRDRKYATGLRTNRATASGYWKATGKDRPIFHK 146 79***********************999999***********8777799************************************ PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 ++lvg++ktLvfy+grapkg+kt+Wvmhe+rle XP_022940954.1 147 ANQLVGMRKTLVFYQGRAPKGRKTEWVMHEFRLE 180 *****************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MMSICLLQLL SSSLATELPC MNHLLKSLQK RTGFLEREEM EKKNISMVES KLPPGFRFHP 60 RDEELVCDYL INKIGSVPHS SSSLFIEVDL NKCEPWDIPR EACVGGKEWY FFSQRDRKYA 120 TGLRTNRATA SGYWKATGKD RPIFHKANQL VGMRKTLVFY QGRAPKGRKT EWVMHEFRLE 180 GPLSPLKDSS PKEDWVLCRL FFKHKEVTAQ PSTGSSSCYN DVAASSSLPG SMDSYISFDQ 240 NPSSHLNEYE QVPCFSIFSQ NQTTPPLSNL IQMEPNPAKN IKNFATVFGG MPNSSTCSSN 300 IDPFGCDSKV LKVVLNNITK METNGNSFTG QPSMGEGSSD SFLSEVGDDI ASLWNR

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MMSICLLQLL SSSLATELPC MNHLLKSLQK RTGFLEREEM EKKNISMVES KLPPGFRFHP  60
RDEELVCDYL INKIGSVPHS SSSLFIEVDL NKCEPWDIPR EACVGGKEWY FFSQRDRKYA  120
TGLRTNRATA SGYWKATGKD RPIFHKANQL VGMRKTLVFY QGRAPKGRKT EWVMHEFRLE  180
GPLSPLKDSS PKEDWVLCRL FFKHKEVTAQ PSTGSSSCYN DVAASSSLPG SMDSYISFDQ  240
NPSSHLNEYE QVPCFSIFSQ NQTTPPLSNL IQMEPNPAKN IKNFATVFGG MPNSSTCSSN  300
IDPFGCDSKV LKVVLNNITK METNGNSFTG QPSMGEGSSD SFLSEVGDDI ASLWNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56010.2	1e-113	NAC family protein