PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022940784.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Nin-like

Protein Properties

Length: 757aa MW: 85539.4 Da PI: 7.6495

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022940784.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	93.5	1.5e-29	512	562	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+i+le+l++yF++++kdAAk++gvc+T+LKriCRq+GIkRWP+Rkik++ XP_022940784.1 512 EKSITLEVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKV 562 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 757 aa Download sequence
MFVLPKHGLE FLLLEMNGVF NTNLITRSDQ EEPRNMLSNE ASPGRERVDV GQEGCSDQSE 60 NNALEGSELC RRLGMGAGEH MGSAPSVMER LIMAVGYIKD IVRDKDVLVQ VWVPVSRGGR 120 SVLITNQLPF SQNSSCTRLA KYRDVSVNYE FTADEDSKKA LGLPGRVFLR KVPEWTPDVR 180 FFRSDEYPRV DHAHEHDVRG TIALPVFEQG SKSCLGVIEV VMVTQQIKYG SEHEILCKAL 240 QAVKLRSSDV ISPPNQKVFN RFNEAVLLEI RDTLRTACET HGLPLAQAWA SCIQQSKEGC 300 RHSDENYSCC VSTVDRACFV ADTRIQDFHE ACSEHHLLKG EGIVGMAFKS NEPCFSSDIT 360 SFRNTEYPLS HHAKLFGLHA AVALRLRCIF ISKTDFVLEF FLPVHCRDPE EQRILLTSLS 420 TVIQYSCRNL RLVTDKECRE ENMEQLHPTN SLLASSVQNI QQCSGSVSLL QELNYDQNGV 480 VEDSEECPTV GNGIFADISM GRTGEKRRTK VEKSITLEVL RQYFAGSLKD AAKSIGVCPT 540 TLKRICRQHG IKRWPSRKIK KVGHSLQKLQ LVIDSVNSAS GAFQTSSLYS NLQELASPYV 600 RKMGDGLKAS SNIRDAASKT APSSLSQSSN SSQCFSFCRH PATGCVMQTA KESDQMRVKV 660 SYGEERIRFR VQKWWRYEEL VKEVGRRFNI RDISKYDLKY LDDECEWVLL TSDAYLQDCF 720 HMYKSSPLQT IKLLLLPSPR HKREEPQTPS FPTFYML

Sequence ? help Back to Top

Protein Sequence Length: 757 aa Download sequence

MFVLPKHGLE FLLLEMNGVF NTNLITRSDQ EEPRNMLSNE ASPGRERVDV GQEGCSDQSE  60
NNALEGSELC RRLGMGAGEH MGSAPSVMER LIMAVGYIKD IVRDKDVLVQ VWVPVSRGGR  120
SVLITNQLPF SQNSSCTRLA KYRDVSVNYE FTADEDSKKA LGLPGRVFLR KVPEWTPDVR  180
FFRSDEYPRV DHAHEHDVRG TIALPVFEQG SKSCLGVIEV VMVTQQIKYG SEHEILCKAL  240
QAVKLRSSDV ISPPNQKVFN RFNEAVLLEI RDTLRTACET HGLPLAQAWA SCIQQSKEGC  300
RHSDENYSCC VSTVDRACFV ADTRIQDFHE ACSEHHLLKG EGIVGMAFKS NEPCFSSDIT  360
SFRNTEYPLS HHAKLFGLHA AVALRLRCIF ISKTDFVLEF FLPVHCRDPE EQRILLTSLS  420
TVIQYSCRNL RLVTDKECRE ENMEQLHPTN SLLASSVQNI QQCSGSVSLL QELNYDQNGV  480
VEDSEECPTV GNGIFADISM GRTGEKRRTK VEKSITLEVL RQYFAGSLKD AAKSIGVCPT  540
TLKRICRQHG IKRWPSRKIK KVGHSLQKLQ LVIDSVNSAS GAFQTSSLYS NLQELASPYV  600
RKMGDGLKAS SNIRDAASKT APSSLSQSSN SSQCFSFCRH PATGCVMQTA KESDQMRVKV  660
SYGEERIRFR VQKWWRYEEL VKEVGRRFNI RDISKYDLKY LDDECEWVLL TSDAYLQDCF  720
HMYKSSPLQT IKLLLLPSPR HKREEPQTPS FPTFYML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	0.0	Nin-like family protein