PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022940783.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Nin-like

Protein Properties

Length: 788aa MW: 88870.9 Da PI: 6.8507

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022940783.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	93.5	1.5e-29	543	593	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+i+le+l++yF++++kdAAk++gvc+T+LKriCRq+GIkRWP+Rkik++ XP_022940783.1 543 EKSITLEVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKV 593 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 788 aa Download sequence
MDFDYMDGLL LDDCWLETAD GTVFLHPNLS SFGANLDPLI GWPATEMNGV FNTNLITRSD 60 QEEPRNMLSN EASPGRERVD VGQEGCSDQS ENNALEGSEL CRRLGMGAGE HMGSAPSVME 120 RLIMAVGYIK DIVRDKDVLV QVWVPVSRGG RSVLITNQLP FSQNSSCTRL AKYRDVSVNY 180 EFTADEDSKK ALGLPGRVFL RKVPEWTPDV RFFRSDEYPR VDHAHEHDVR GTIALPVFEQ 240 GSKSCLGVIE VVMVTQQIKY GSEHEILCKA LQAVKLRSSD VISPPNQKVF NRFNEAVLLE 300 IRDTLRTACE THGLPLAQAW ASCIQQSKEG CRHSDENYSC CVSTVDRACF VADTRIQDFH 360 EACSEHHLLK GEGIVGMAFK SNEPCFSSDI TSFRNTEYPL SHHAKLFGLH AAVALRLRCI 420 FISKTDFVLE FFLPVHCRDP EEQRILLTSL STVIQYSCRN LRLVTDKECR EENMEQLHPT 480 NSLLASSVQN IQQCSGSVSL LQELNYDQNG VVEDSEECPT VGNGIFADIS MGRTGEKRRT 540 KVEKSITLEV LRQYFAGSLK DAAKSIGVCP TTLKRICRQH GIKRWPSRKI KKVGHSLQKL 600 QLVIDSVNSA SGAFQTSSLY SNLQELASPY VRKMGDGLKA SSNIRDAASK TAPSSLSQSS 660 NSSQCFSFCR HPATGCVMQT AKESDQMRVK VSYGEERIRF RVQKWWRYEE LVKEVGRRFN 720 IRDISKYDLK YLDDECEWVL LTSDAYLQDC FHMYKSSPLQ TIKLLLLPSP RHKREEPQTP 780 SFPTFYML

Sequence ? help Back to Top

Protein Sequence Length: 788 aa Download sequence

MDFDYMDGLL LDDCWLETAD GTVFLHPNLS SFGANLDPLI GWPATEMNGV FNTNLITRSD  60
QEEPRNMLSN EASPGRERVD VGQEGCSDQS ENNALEGSEL CRRLGMGAGE HMGSAPSVME  120
RLIMAVGYIK DIVRDKDVLV QVWVPVSRGG RSVLITNQLP FSQNSSCTRL AKYRDVSVNY  180
EFTADEDSKK ALGLPGRVFL RKVPEWTPDV RFFRSDEYPR VDHAHEHDVR GTIALPVFEQ  240
GSKSCLGVIE VVMVTQQIKY GSEHEILCKA LQAVKLRSSD VISPPNQKVF NRFNEAVLLE  300
IRDTLRTACE THGLPLAQAW ASCIQQSKEG CRHSDENYSC CVSTVDRACF VADTRIQDFH  360
EACSEHHLLK GEGIVGMAFK SNEPCFSSDI TSFRNTEYPL SHHAKLFGLH AAVALRLRCI  420
FISKTDFVLE FFLPVHCRDP EEQRILLTSL STVIQYSCRN LRLVTDKECR EENMEQLHPT  480
NSLLASSVQN IQQCSGSVSL LQELNYDQNG VVEDSEECPT VGNGIFADIS MGRTGEKRRT  540
KVEKSITLEV LRQYFAGSLK DAAKSIGVCP TTLKRICRQH GIKRWPSRKI KKVGHSLQKL  600
QLVIDSVNSA SGAFQTSSLY SNLQELASPY VRKMGDGLKA SSNIRDAASK TAPSSLSQSS  660
NSSQCFSFCR HPATGCVMQT AKESDQMRVK VSYGEERIRF RVQKWWRYEE LVKEVGRRFN  720
IRDISKYDLK YLDDECEWVL LTSDAYLQDC FHMYKSSPLQ TIKLLLLPSP RHKREEPQTP  780
SFPTFYML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	0.0	Nin-like family protein