PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022940516.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 582aa    MW: 64751 Da    PI: 5.6784
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022940516.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS418.27e-1282125811373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+elL+ecA+a++++ +e  ++l+a  +  +s +g+p+qRl ay++e+L ar  +s+ ++y+al+++e +   s++ l+++++++e++P+lkf++
  XP_022940516.1 212 LKELLIECARALAENRMEDFDNLVAIARGAVSISGEPIQRLGAYMVEGLVARKEESGANIYRALNCREPA---SDDLLSYMHMLYEICPYLKFGY 303
                     5799*****************************************************************9...99******************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     ++aN aI ea  +e+r+HiiDf+i+qG+QW++LlqaLa+Rp+g+p++RiTg+++p s+  + e le +++rLa++ ++ g+p+ef+ l      d
  XP_022940516.1 304 MAANGAIAEACRNEDRIHIIDFQITQGTQWLTLLQALAARPGGAPHVRITGIDDPVSKyaRGEGLEVVERRLAEVSRKYGIPVEFHGL-PVFAPD 397
                     *******************************************************999999**************************6.777899 PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++  +L+++pgEalaVn+ lqlh+++desv+++++rd +L++vkslsP+vv++veqe+++n+++F++rf+e+++yy a+f+s++++lpr+s++ i
  XP_022940516.1 398 VTRGMLDIRPGEALAVNFPLQLHHTPDESVDVNNPRDGLLRMVKSLSPRVVTLVEQESNTNTTPFFNRFVETMDYYLAIFESIDVTLPRNSKKGI 492
                     9********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     ++E+++l+++ivnv+aceg+er+erhe ++kW+ rl++aGF + pls+++++ +++llr ++ + y++ e++g+++lgWk+r+L+s+SaW
  XP_022940516.1 493 NIEQHCLAKDIVNVIACEGREREERHELFGKWKTRLTMAGFCQFPLSSYVNSVIRSLLRCYS-KHYTLVEKDGAMLLGWKNRNLISASAW 581
                     ***********************************************************999.55************************* PP

Sequence ? help Back to Top
Protein Sequence    Length: 582 aa     Download sequence    
MDSHQLFGFG VNSAGVSCTP YSSIPSLPNT LLGPLKFSVR NSPASSSFFS SSYFELDSFR  60
ATTVSDNQDQ RNSPENLSGL SPSCNSSFET NSFNQIASSN LDPVSNAFVY DGCSNENISY  120
TLKQLESVLM GPDNEEVVSK PDASFGDSSR PQIMGQRSYS WSQDRQGGLN LVQSQTLPVS  180
VSQRSQAVHL GKRQKSMDES ILQQGGFSYD NLKELLIECA RALAENRMED FDNLVAIARG  240
AVSISGEPIQ RLGAYMVEGL VARKEESGAN IYRALNCREP ASDDLLSYMH MLYEICPYLK  300
FGYMAANGAI AEACRNEDRI HIIDFQITQG TQWLTLLQAL AARPGGAPHV RITGIDDPVS  360
KYARGEGLEV VERRLAEVSR KYGIPVEFHG LPVFAPDVTR GMLDIRPGEA LAVNFPLQLH  420
HTPDESVDVN NPRDGLLRMV KSLSPRVVTL VEQESNTNTT PFFNRFVETM DYYLAIFESI  480
DVTLPRNSKK GINIEQHCLA KDIVNVIACE GREREERHEL FGKWKTRLTM AGFCQFPLSS  540
YVNSVIRSLL RCYSKHYTLV EKDGAMLLGW KNRNLISASA WY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-162GRAS family protein