PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022940406.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TALE

Protein Properties

Length: 433aa MW: 48111.6 Da PI: 6.5444

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022940406.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23	1.4e-07	382	415	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + XP_022940406.1 382 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 415 469*****************************87 PP
2	ELK	22.5	2.7e-08	336	357	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+ +Y+++++++++E++ XP_022940406.1 336 ELKHELKAGYKEKIVDIREEIL 357 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MAYHNPLSHD LPLHFSDQQP PQNQPLSDAS LRTILPDPKS HHHHHHPPQT APNWLNNALL 60 RNQNPHSHYS TDTTTTATAA VNTNFLNLHT TASDSTVSHS SNQWLSRPIL QRNHSDVIAD 120 VAAAGDAMIG AANDANSGDG LNKSEGMAVE PGGGGGGGGE GVLNWQYARY KAEILAHPLY 180 EQLLSAHVAC LRIATPVDQL PRIDAQLAQS QNVVAKYSAL GHTAPLMVGD DKDLDQFMTH 240 YVLLLCSFKE QLQQHVRVHA MEAVMACWDI EQSLQSLTGV SPGEGTGATM SDDDDDQVDS 300 DANLFEASLD CPDTMGFGPL IPTETERSLM ERVRQELKHE LKAGYKEKIV DIREEILRKR 360 RAGKLPGDTT SVLKQWWQSH SKWPYPTEED KARLVQETGL QLKQINNWFI NQRKRNWHSN 420 PSSSTNLKSK RKR

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MAYHNPLSHD LPLHFSDQQP PQNQPLSDAS LRTILPDPKS HHHHHHPPQT APNWLNNALL  60
RNQNPHSHYS TDTTTTATAA VNTNFLNLHT TASDSTVSHS SNQWLSRPIL QRNHSDVIAD  120
VAAAGDAMIG AANDANSGDG LNKSEGMAVE PGGGGGGGGE GVLNWQYARY KAEILAHPLY  180
EQLLSAHVAC LRIATPVDQL PRIDAQLAQS QNVVAKYSAL GHTAPLMVGD DKDLDQFMTH  240
YVLLLCSFKE QLQQHVRVHA MEAVMACWDI EQSLQSLTGV SPGEGTGATM SDDDDDQVDS  300
DANLFEASLD CPDTMGFGPL IPTETERSLM ERVRQELKHE LKAGYKEKIV DIREEILRKR  360
RAGKLPGDTT SVLKQWWQSH SKWPYPTEED KARLVQETGL QLKQINNWFI NQRKRNWHSN  420
PSSSTNLKSK RKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	413	433	RKRNWHSNPSSSTNLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	1e-178	TALE family protein