PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022940404.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | TALE | ||||||||
Protein Properties | Length: 445aa MW: 49404.9 Da PI: 6.5448 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 22.9 | 1.4e-07 | 382 | 415 | 21 | 54 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + XP_022940404.1 382 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 415 469*****************************87 PP | |||||||
2 | ELK | 22.4 | 2.8e-08 | 336 | 357 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+ +Y+++++++++E++ XP_022940404.1 336 ELKHELKAGYKEKIVDIREEIL 357 9*******************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 445 aa Download sequence |
MAYHNPLSHD LPLHFSDQQP PQNQPLSDAS LRTILPDPKS HHHHHHPPQT APNWLNNALL 60 RNQNPHSHYS TDTTTTATAA VNTNFLNLHT TASDSTVSHS SNQWLSRPIL QRNHSDVIAD 120 VAAAGDAMIG AANDANSGDG LNKSEGMAVE PGGGGGGGGE GVLNWQYARY KAEILAHPLY 180 EQLLSAHVAC LRIATPVDQL PRIDAQLAQS QNVVAKYSAL GHTAPLMVGD DKDLDQFMTH 240 YVLLLCSFKE QLQQHVRVHA MEAVMACWDI EQSLQSLTGV SPGEGTGATM SDDDDDQVDS 300 DANLFEASLD CPDTMGFGPL IPTETERSLM ERVRQELKHE LKAGYKEKIV DIREEILRKR 360 RAGKLPGDTT SVLKQWWQSH SKWPYPTEED KARLVQETGL QLKQINNWFI NQRKRNWHSN 420 PSSSTNLKSK RKRSNAGENS SDRFK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 413 | 433 | RKRNWHSNPSSSTNLKSKRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25220.1 | 0.0 | TALE family protein |