PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022940061.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

FAR1

Protein Properties

Length: 785aa MW: 89972 Da PI: 6.4806

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022940061.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.9	1.7e-23	94	180	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+eYA+ vGF +++++s++skr+g++++ + Cs+ g+++e++++ ++r+ +tgC+a++++kk++dgkw v+ + eHnHe++p XP_022940061.1 94 SFYREYARFVGFGITIKASRRSKRSGKFIDIKIACSRFGSKRESTTT----VKPRPCMKTGCDASIHIKKREDGKWFVHGFIREHNHEICP 180 5**************************************998877....99*********************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 785 aa Download sequence
MDIDLELPSS DQERLGILES KNDGMDLDQT HGEGRAANSP TRAELSQGMS IPNTETNSVR 60 DQMDIVNVGI NHIMGPAFEP KIGLEFESKE EAYSFYREYA RFVGFGITIK ASRRSKRSGK 120 FIDIKIACSR FGSKRESTTT VKPRPCMKTG CDASIHIKKR EDGKWFVHGF IREHNHEICP 180 DDFHYALKGK NKNPDIIASE KNGLQLALDE GDVHLMLEHF MHMQEMNPNF FYAVDFNQEK 240 QLRSVLWVDA KARHDYKNFS DVIFFDTHYI SSGYQIPFVP IVGVNHHFQY VLFGGALIGD 300 IATSSLIWLM KTWLKAVGGP APTVVLTDRE SFLKEAVADV FPKAIHLFSL WHILTRVREK 360 LGKIIDQNRN FMESFDKCIY GSWRDEEFEK KWWEMVEKFE VKENEWLQLL FDDHKKWVPA 420 YVKNYFLAGM CTSERSGSVA SFFDNYISKE ATFKEFVERS EIFSKDMLEL EADADFETRH 480 QEPALKCLSP FEQQTATIYV TTIFKKFQLE VVGAASCRVH EQTEDGAIVT YQVDDLEEQQ 540 KFLVAWNKAE LDIRCRCRSF EHRGILCRHA ILVLQVSGVT SIPQKYILKR WTRNAKVRLS 600 ESSNRLHYRV ARFNHLCKQA IRLSEVGSLS RETYDIAFDA LEDVLKQCVF VNNSNKSFAE 660 TNMVSVGFVD VEDDDRGEDM AKSSRKKKTI KKGKITKQAR YKSSEAEVDS RAAALDGCTN 720 SPFCDGPEGY YSLQAMQSLD QSPSVVARVG PRDDRQTIQS LGQLNPREPG AQGRFDIENN 780 LQDME

Sequence ? help Back to Top

Protein Sequence Length: 785 aa Download sequence

MDIDLELPSS DQERLGILES KNDGMDLDQT HGEGRAANSP TRAELSQGMS IPNTETNSVR  60
DQMDIVNVGI NHIMGPAFEP KIGLEFESKE EAYSFYREYA RFVGFGITIK ASRRSKRSGK  120
FIDIKIACSR FGSKRESTTT VKPRPCMKTG CDASIHIKKR EDGKWFVHGF IREHNHEICP  180
DDFHYALKGK NKNPDIIASE KNGLQLALDE GDVHLMLEHF MHMQEMNPNF FYAVDFNQEK  240
QLRSVLWVDA KARHDYKNFS DVIFFDTHYI SSGYQIPFVP IVGVNHHFQY VLFGGALIGD  300
IATSSLIWLM KTWLKAVGGP APTVVLTDRE SFLKEAVADV FPKAIHLFSL WHILTRVREK  360
LGKIIDQNRN FMESFDKCIY GSWRDEEFEK KWWEMVEKFE VKENEWLQLL FDDHKKWVPA  420
YVKNYFLAGM CTSERSGSVA SFFDNYISKE ATFKEFVERS EIFSKDMLEL EADADFETRH  480
QEPALKCLSP FEQQTATIYV TTIFKKFQLE VVGAASCRVH EQTEDGAIVT YQVDDLEEQQ  540
KFLVAWNKAE LDIRCRCRSF EHRGILCRHA ILVLQVSGVT SIPQKYILKR WTRNAKVRLS  600
ESSNRLHYRV ARFNHLCKQA IRLSEVGSLS RETYDIAFDA LEDVLKQCVF VNNSNKSFAE  660
TNMVSVGFVD VEDDDRGEDM AKSSRKKKTI KKGKITKQAR YKSSEAEVDS RAAALDGCTN  720
SPFCDGPEGY YSLQAMQSLD QSPSVVARVG PRDDRQTIQS LGQLNPREPG AQGRFDIENN  780
LQDME

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.2	0.0	FAR1 family protein