PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022939503.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 256aa MW: 27855 Da PI: 9.1064 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.2 | 0.0011 | 87 | 109 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H ++H XP_022939503.1 87 YECKTCSRTFPSFRALGGHRSSH 109 99**********99999999888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MNPNGFSEPN SELLGRCNLS SSSSSIGGGG GGGGGSGGED EQEDVAKCLI LLSQGLPASQ 60 PSSSMVKFIE APQGQNGAGK AAECYAYECK TCSRTFPSFR ALGGHRSSHK NPAMAAGDQK 120 SISGTSPAYK HQQQRLNNTI SSPFDPLRMN RTGYYHKTHE FSVCGSGFTS VQALSGHMRR 180 HRRGCGRDSG EIAHRRPQRH RSNLLCLELD LNLPAAEEDK RDRSGVVSMA AMDRVSSHYR 240 EHRAFLIEKF RLNYNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04390.1 | 2e-21 | C2H2 family protein |