PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022939466.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 449aa    MW: 51950.3 Da    PI: 7.1618
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022939466.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.90.00069207229123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     y C+ C    +rk++L+rH+r++
  XP_022939466.1 207 YFCEFCLNFMKRKEQLQRHMRKC 229
                     78*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    
MGSIDVQSTN PENGSDAAVS GDGRQKPVSA DGMNQTSNEP EGTAPEKPKE LGPTKKRLSS  60
MLPLDVGTRV MCRWRDGKYH PVKVIERRKL QATGFSDYEY YVHYTEFNRR LDEWVKLDQL  120
DLDSVETVVD EKVEDKVTGL KMTRHQKRKI DETHVEGHEE LDAASLREHE EFTKVKNIAT  180
IELGRYEIET WYFSPFPPEY NDTTKLYFCE FCLNFMKRKE QLQRHMRKCD LKHPPGDEIY  240
RCGTLSMFEV DGKKNKVYGQ NLCYLAKLFL DHKTLYYDVD LFLFYVLCEC DDRGCHMVGY  300
FSKEKHSEES YNLACILTLP PYQRKGYGKF LIAFSYELSK KEGKVGTPER PLSDLGLVSY  360
RGYWTRVLLD ILKKHKANIS IKELSDMTAI KAEDILNTLQ SLELIQYRKG QHVICADPKV  420
LDRHLKAAGR GGLEVDVSKL IWTPYREQG