PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022939213.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 266aa    MW: 30065 Da    PI: 6.4023
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022939213.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B365.39.4e-2175173196
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 
                     f+k+l++sdv++++r++lpkk ae+h   ++++e++ +t+ d++g  +W++k+++  +++s++yvl+ ++ +Fv+a+gL+ gDf++ +  ++ ++
  XP_022939213.1  75 FEKELKNSDVSSLRRMILPKKAAETHlpALDSKEGIIITMDDLDGlHVWSFKYRFwpNNNSRMYVLE-NTGDFVNAHGLQLGDFIMVY--QDyEN 166
                     99**************************7778899**********9*******9989999999***9.******************99..66677 PP

                     E..EEEE CS
              B3  90 felvvkv 96 
                      ++v+++
  XP_022939213.1 167 LNYVIQA 173
                     7777765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MPFLDYQPPP PPPPPPPPRD LAAAVQAASL HRKKRMSRHR RRSSSNLHFS FPSSSAALLP  60
PPPRVIDPRR LKFLFEKELK NSDVSSLRRM ILPKKAAETH LPALDSKEGI IITMDDLDGL  120
HVWSFKYRFW PNNNSRMYVL ENTGDFVNAH GLQLGDFIMV YQDYENLNYV IQAKKASDQE  180
MYTGIGTNVV INGDIVFHDY DPNKVGNSIY VPSPTMDVSS FIYDTSSAFD NDSTFDFMSG  240
SVTNYSRMGG LEGFGSVENL SLDEFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.12e-83B3 family protein