PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022938394.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | Dof | ||||||||
Protein Properties | Length: 349aa MW: 38096.3 Da PI: 8.7649 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 117.3 | 6e-37 | 69 | 129 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+ lkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGa+r vPvGgg+r++ k+s XP_022938394.1 69 PEAGLKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGAMRSVPVGGGCRRSSKRS 129 67889**************************************************998765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence |
MVFSSVPVFL DPPNWPSQQP NQLQPSSCET NNAQHLPPPP PPAGGAGGPG SIRPGSMTDR 60 ARLAKIPQPE AGLKCPRCES TNTKFCYFNN YSLTQPRHFC KTCRRYWTRG GAMRSVPVGG 120 GCRRSSKRSK GGSNRSKSPG GSSTSTSTVS SNSCTTDILS HQLAHPTPPP PPPPPTHFPF 180 LGQNLQHLSD FGNLGLNFEA LQIPSMASSG GESSILSSGI TDHHQWKIPF FANLHQQNGL 240 YSNFMAEEHH QHQHQHQAQA ADFSNYQRLS KPLMDTGFSS STPHHQLGNI NNNTMKIMEE 300 TQGIHNLSRN FLGIQPNDPF WNSTMSTTTT TTTTPGNTAW STDQISDLL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 123 | 129 | RRSSKRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G02460.1 | 8e-37 | Dof family protein |