PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022938108.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 244aa    MW: 27672.8 Da    PI: 8.3716
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022938108.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B31084.4e-3436140199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k ltpsdv+k++rlv+pk++ae++      g    ++  l++edesg+ W+++++y+++s++yvltkGW +Fvk+++L++gD+vvF++++r++
  XP_022938108.1  36 FEKPLTPSDVGKLNRLVIPKQYAEKYfplspgGDTADKGLLLSFEDESGKMWRFRYSYWNSSQSYVLTKGWTRFVKEKRLDAGDVVVFERHRRDG 130
                     99*****************************8666668999************************************************999999 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                      +l++++ r+
  XP_022938108.1 131 DRLFIGWKRR 140
                     99****9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MSLNHFSSDC HLHHPKSSAS AVDHHLIHHH HKHPMFEKPL TPSDVGKLNR LVIPKQYAEK  60
YFPLSPGGDT ADKGLLLSFE DESGKMWRFR YSYWNSSQSY VLTKGWTRFV KEKRLDAGDV  120
VVFERHRRDG DRLFIGWKRR SPVSTAETAA ATRIFCSSNP YPSHHHHHNH NHLPSPPYQS  180
YDCPHAESSV QSQTVSVGNS KILRLFGVDL ECQTDVSEPE QPSTLGGGSG LSGQDPTRHS  240
FYTH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36080.13e-65B3 family protein