PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022937991.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | YABBY | ||||||||
Protein Properties | Length: 189aa MW: 21268.1 Da PI: 8.8024 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 195.7 | 2e-60 | 6 | 161 | 4 | 167 |
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvss 98 +s+ eq+Cy+ CnfCn +lavsvP + l+ +vtvrCGhC++l svn+a a q l+ ++ + s ++ + + + +l s + +++ +t + XP_022937991.1 6 NSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLSWKNS-QAS-SHSHNGNAADYRVELGSSSKCNNKMKTRAPI 98 6789**********************************************999999886.222.2222333333344444444444444444444 PP YABBY 99 eklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkih 167 ++ ++n+d+ v ++rPPek+qrvPsayn+fikeeiqrika+nPdi+hreafs+aaknWah+P+i XP_022937991.1 99 QN-NTNDDQRV-----INRPPEKKQRVPSAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQ 161 33.33444433.....58*************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MSSCINSAQE QLCYIPCNFC NIVLAVSVPC SNLLDIVTVR CGHCSNLWSV NMAAAFQSLS 60 WKNSQASSHS HNGNAADYRV ELGSSSKCNN KMKTRAPIQN NTNDDQRVIN RPPEKKQRVP 120 SAYNKFIKEE IQRIKANNPD ITHREAFSTA AKNWAHYPHI QCLMLEANNL KTQKDGSEKH 180 YMSVPGLHY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 7e-78 | YABBY family protein |